Rename config.schema package to config.spec#6485
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bentsherman merged 3 commits intomasterfrom Oct 15, 2025
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Signed-off-by: Ben Sherman <bentshermann@gmail.com>
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christopher-hakkaart
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Docs look good. One suggestion to make the section title sentence case.
pditommaso
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Oct 15, 2025
Co-authored-by: Chris Hakkaart <chris.hakkaart@seqera.io> Signed-off-by: Ben Sherman <bentshermann@gmail.com>
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…es (#6495) This commit addresses two issues stemming from the recent config.schema to config.spec package rename in #6485: 1. End-to-End Test Infrastructure Fix - Fixed test-e2e/run.sh to use the proper `installScratch` Makefile target - Changed from separate `make assemble` + `make install` to combined `make releaseInfo assemble installScratch` - The `installScratch` target (BUILD_PACK=1) is specifically designed for creating scratch container images used in the e2e test pipeline - This ensures the Nextflow runtime is correctly prepared for containerization and deployment to the Seqera Platform test environments 2. Backward Compatibility - Added deprecated type aliases in the old `nextflow.config.schema` package - Prevents `NoClassDefFoundError: nextflow/config/schema/ConfigScope` when loading plugins compiled against older Nextflow versions - Added deprecated classes: ConfigScope, ConfigOption, ScopeName, PlaceholderName - All deprecated classes delegate to their new counterparts in config.spec - Includes @deprecated annotations with Javadoc pointing to new locations The e2e test fixes ensure that the automated testing pipeline against Seqera Platform staging and production environments works correctly, while the compatibility aliases give plugin developers time to migrate to the new package structure. Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
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…es (#6495) This commit addresses two issues stemming from the recent config.schema to config.spec package rename in #6485: 1. End-to-End Test Infrastructure Fix - Fixed test-e2e/run.sh to use the proper `installScratch` Makefile target - Changed from separate `make assemble` + `make install` to combined `make releaseInfo assemble installScratch` - The `installScratch` target (BUILD_PACK=1) is specifically designed for creating scratch container images used in the e2e test pipeline - This ensures the Nextflow runtime is correctly prepared for containerization and deployment to the Seqera Platform test environments 2. Backward Compatibility - Added deprecated type aliases in the old `nextflow.config.schema` package - Prevents `NoClassDefFoundError: nextflow/config/schema/ConfigScope` when loading plugins compiled against older Nextflow versions - Added deprecated classes: ConfigScope, ConfigOption, ScopeName, PlaceholderName - All deprecated classes delegate to their new counterparts in config.spec - Includes @deprecated annotations with Javadoc pointing to new locations The e2e test fixes ensure that the automated testing pipeline against Seqera Platform staging and production environments works correctly, while the compatibility aliases give plugin developers time to migrate to the new package structure. Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
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Follow-up to #6361
Refactors config classes and packages to use "spec" instead of "schema", since "schema" now refers to the schema of a plugin spec