Tutorials

Basics | Solution NMR | Solid-state NMR | Structure | NMR Exchange Format | Metabolomics | Screening | Macro Writing | Old Version 3.0 Tutorials

Basics

Beginner Tutorial

Find out how to load and display spectra, change contour levels, zoom, peak pick, work with strips and print spectra.

Introduction to NMR Tutorial

Learn how to open and investigate some spectra and make peak assignments from an imported Chemical Shift List.

BMRB / NMR-STAR Import

Learn how to download an NMR-STAR file from the BMRB, import it into Analysis and create a simulated peak list from the chemical shifts.

Solution NMR

Backbone Assignment Tutorial

Learn how to do the semi-automated backbone assignment of a protein using our dedicated tools.

Side-chain Assignment Tutorial

Find out how you can use a variety of features to help you assign the aliphatic side chains of a protein.

Chemical Shift Perturbation Analysis Tutorial

Learn how to analyse titration data, plot chemical shift changes on a histogram, obtain binding curves and Kd values, and show your results on a structure in PyMOL.

Dynamics Tutorial

This tutorial introduces our new beta-version Relaxation module with which you can analyse T1, T2 and Heteronuclear NOE data and do reduced spectral density mapping.

Solid-state NMR

Sup35 Peptide Assignment Tutorial

Find out how to use Analysis to assign a small uniformly labelled peptide using 13C-detected spectra.

HETs Assignment Tutorial

Use Analysis to assign uniformly labelled HETs218 using 13C-detected spectra.

SH3 Assignment Tutorial

Learn how to use AnalysisAssign to make manual assignments in solid-state NMR spectra, and assign a small protein using [1,3]-13C and [2]-13C labelled glycerol samples.

Backbone walk through 1H detected solid-state NMR spectra and sequence showing atoms linked by the peaks

1H Detection Assignment Tutorial

Learn how to assign a protein using 1H-detected spectra recorded with fast MAS.

Structure

Structure Tutorial

Learn how to export structure calculation data to XPLOR and then import and analyse the results. You can follow this tutorial even if you don’t have XPLOR installed on your computer.

NMR Exchange Format (NEF)

How To Import/Export NEF files

Learn how to use NEF to move data between CCPN projects.

How To Import Reference Mixtures from NEF

Find out how to import Reference Mixture data stored in a NEF file, ready to start a analysing a new set of screening data.

How To Create a NEF file from Tabular Data

Instructions for how to create a NEF file from old tabular data in order to import it into CcpNmr Analysis or other programs.

How To Manipulate Data with NEF Pipelines

Learn how to export data to MARS or iPine for automatic assignment using the NEF Pipelines software written by Gary Thompson.

NEF Workshop

Watch a recording of the demos from our online NEF Workshop in November 2022.

NMRtist logo, NEF file extract and CcpNmr Analysis Chemical Shift Table

Import from NMRtist

Learn how to import assignments from NMRtist using NEF files.

Metabolomics

Profile by Reference Tutorial

Find out how to build up a profile of compounds present in metabolomics samples from our CASMDB database of references.

Create Database Tutorial

Learn how to add your own custom compound to your reference database.

Screening

Screen capture of Hit Analysis Graphing module

Introductory Screen Tutorial

Learn how to use AnalysisScreen, including data import from Excel, the use Pipelines and the Hit Analysis module.

Screen capture from AnalysisScreen Mixtures Tutorial

Mixtures Tutorial

Find out how to generate, analyse and edit compound mixtures for your screening library.

Macro Writing

Macro Writing Tutorial

Learn how easily to write Python macros in CcpNmr Analysis Version 3, so you can create shortcuts and manipulate and analyse your data in bespoke ways.

GUI Macro Writing Tutorial

Find out how to make your macros more user friendly by adding a Graphical User Interface (GUI) in the form of a pop-up dialog box.