fix: Run dependencies with non-existent ancient files earlier#1202
Merged
Conversation
johanneskoester
approved these changes
Oct 21, 2021
|
Kudos, SonarCloud Quality Gate passed!
|
pvandyken
pushed a commit
to pvandyken/snakemake
that referenced
this pull request
Nov 15, 2021
…uming job (snakemake#1202) Fixes snakemake#946 Co-authored-by: Johannes Köster <johannes.koester@uni-due.de>
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.








Fixes #946
Description
During DAG creation,
ancient()input files are not added to_n_until_ready, regardless of whether the input file exists. This PR addsancient()input files to_n_until_readyif they do not exist.QC
docs/) is updated to reflect the changes or this is not necessary (e.g. if the change does neither modify the language nor the behavior or functionalities of Snakemake).