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Fix a bunch of compilation errors#488

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adamant-pwn merged 6 commits intomasterfrom
compile-error-fixes
Jun 19, 2024
Merged

Fix a bunch of compilation errors#488
adamant-pwn merged 6 commits intomasterfrom
compile-error-fixes

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Pull request for CI and review.

@adamant-pwn adamant-pwn force-pushed the compile-error-fixes branch from 24b1c13 to 043bc5a Compare June 19, 2024 02:13
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adamant-pwn commented Jun 19, 2024

Note: We also need to merge karasikov/caches#6 as a part of this change, and update the submodule (Done). But generally, do we still need to diverge from the upstream cache?

@adamant-pwn adamant-pwn requested a review from hmusta June 19, 2024 02:27
@adamant-pwn adamant-pwn merged commit 82f35fc into master Jun 19, 2024
@adamant-pwn adamant-pwn deleted the compile-error-fixes branch June 19, 2024 16:59
adamant-pwn added a commit that referenced this pull request Jul 1, 2024
* Fix a bunch of compilation errors (#488)

Update spdlog, add missing include, etc

* Update htslib (#490)

* install libdeflate-dev

* Link against libdeflate
adamant-pwn added a commit that referenced this pull request Jul 1, 2024
* Fix a bunch of compilation errors (#488)

Update spdlog, add missing include, etc

* Update htslib (#490)

* install libdeflate-dev

* Link against libdeflate

* Install libdeflate on clang
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