MRG, MAINT: Improve server env#8656
Merged
larsoner merged 4 commits intomne-tools:masterfrom Dec 14, 2020
Merged
Conversation
Member
Author
|
Old: New: @GuillaumeFavelier I got a segfault when I tried to remove |
larsoner
commented
Dec 14, 2020
| - nbclient | ||
| - mffpy>=0.5.7 | ||
| - pip: | ||
| - mne |
Member
Author
There was a problem hiding this comment.
mne and jupyter are stuck in pip because they require / pull in PyQt5, which often breaks headless servers (anything that tries to import PyQt5 will die because Qt5 throws an error)
Contributor
To fetch the version of |
Member
Author
|
Pushed a commit for the @GuillaumeFavelier you happy? If so I'll merge when green |
larsoner
added a commit
to agramfort/mne-python
that referenced
this pull request
Dec 16, 2020
* upstream/master: (42 commits) MRG, ENH: Add DICS bias tests (mne-tools#8610) MRG, BUG, ENH: Add window option (mne-tools#8662) BUG: Fix alpha for volumes (mne-tools#8663) MRG, BUG: Fix bugs with envcorr (mne-tools#8658) MRG, ENH: Progressbar for csd_morlet (mne-tools#8608) Render is necessary now (mne-tools#8657) VIZ: Fix head size (mne-tools#8651) MRG, MAINT: bump sphinxcontrib-bitex version (mne-tools#8653) MRG, MAINT: Improve server env (mne-tools#8656) BUG: Mayavi center (mne-tools#8644) VIZ, ENH: allow show/hide annotations by label (mne-tools#8624) Add regression test for EEGLAB data with a chanlocs struct (mne-tools#8647) FIX: scalar_bar (mne-tools#8643) MRG: Small fix to tutorial; rename plot_events ordinate label to "Event id"; improve some SSP docstrings (mne-tools#8612) MRG, ENH: make plot alignment use defaults for colors (mne-tools#8553) BUG: Fix passing of channel type (mne-tools#8638) FIX: fixed loop over norm PSF/CTF options (mne-tools#8636) MRG, BUG: Pass kwargs (mne-tools#8630) DOC: Clearer error message (mne-tools#8631) BUG: Fix number of labels (mne-tools#8629) ...
larsoner
added a commit
to wmvanvliet/mne-python
that referenced
this pull request
Dec 16, 2020
* upstream/master: (38 commits) MRG, ENH: Add DICS bias tests (mne-tools#8610) MRG, BUG, ENH: Add window option (mne-tools#8662) BUG: Fix alpha for volumes (mne-tools#8663) MRG, BUG: Fix bugs with envcorr (mne-tools#8658) MRG, ENH: Progressbar for csd_morlet (mne-tools#8608) Render is necessary now (mne-tools#8657) VIZ: Fix head size (mne-tools#8651) MRG, MAINT: bump sphinxcontrib-bitex version (mne-tools#8653) MRG, MAINT: Improve server env (mne-tools#8656) BUG: Mayavi center (mne-tools#8644) VIZ, ENH: allow show/hide annotations by label (mne-tools#8624) Add regression test for EEGLAB data with a chanlocs struct (mne-tools#8647) FIX: scalar_bar (mne-tools#8643) MRG: Small fix to tutorial; rename plot_events ordinate label to "Event id"; improve some SSP docstrings (mne-tools#8612) MRG, ENH: make plot alignment use defaults for colors (mne-tools#8553) BUG: Fix passing of channel type (mne-tools#8638) FIX: fixed loop over norm PSF/CTF options (mne-tools#8636) MRG, BUG: Pass kwargs (mne-tools#8630) DOC: Clearer error message (mne-tools#8631) BUG: Fix number of labels (mne-tools#8629) ...
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
I really just want to add
nibabelandnilearnto ourserver_environmentbecause they are needed for some viz functions, but then I noticed some other stuff, so this PR will:nibabelandnilearnvtk_devchanneldefaultschannelnumpy<1.19.0pinHopefully it all works but if it doesn't, hopefully I can at least get (1) in there. I'll need to double-check that the env otherwise looks the same in terms of what gets installed by looking at
mne sys_info.