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MAINT: Update documentation and logging#155

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scott-huberty merged 4 commits intolina-usc:mainfrom
scott-huberty:maintenance
Jan 18, 2024
Merged

MAINT: Update documentation and logging#155
scott-huberty merged 4 commits intolina-usc:mainfrom
scott-huberty:maintenance

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  • Nice new landing page
  • Added covenience makefile commands
  • improved logging of flagged epochs

- Nice new landing page
- Added covenience makefile commands
- improved logging of flagged epochs
We already throw an error if the user has mne iclabel version less than .5, so added a pin for minimum version of .5 in the requirements file. MNE is also throwing a future warnign for an API kwarg change in epochs.get_data, where the current default copy=False is changing to copy=True. See mne-tools/mne-python#12121 . I'm a little worried about the additional copies we will incur every single time that we call that method, but I dont have a strong reason to stray from what MNE believes is a bug fix so lets go with it and see how it plays.
- This should resolve the core issue of the runner not being able to find the most up to date
mne_iclabel wheel.
Since MNE iclabel 0.5, torch is NOT installed by default.
@scott-huberty scott-huberty merged commit c84108c into lina-usc:main Jan 18, 2024
Andesha pushed a commit to Andesha/pylossless that referenced this pull request Apr 1, 2025
* MAINT: Update documentation and logging

- Nice new landing page
- Added covenience makefile commands
- improved logging of flagged epochs

* FIX, MAINT: Bump iclabel version and ignore mne warning

We already throw an error if the user has mne iclabel version less than .5, so added a pin for minimum version of .5 in the requirements file. MNE is also throwing a future warnign for an API kwarg change in epochs.get_data, where the current default copy=False is changing to copy=True. See mne-tools/mne-python#12121 . I'm a little worried about the additional copies we will incur every single time that we call that method, but I dont have a strong reason to stray from what MNE believes is a bug fix so lets go with it and see how it plays.

* FIX, MAINT: Bumpg GH actions checkout versions

- This should resolve the core issue of the runner not being able to find the most up to date
mne_iclabel wheel.

* FIX, TST: Install torch in doc building CI

Since MNE iclabel 0.5, torch is NOT installed by default.
Andesha pushed a commit to Andesha/pylossless that referenced this pull request Apr 1, 2025
* MAINT: Update documentation and logging

- Nice new landing page
- Added covenience makefile commands
- improved logging of flagged epochs

* FIX, MAINT: Bump iclabel version and ignore mne warning

We already throw an error if the user has mne iclabel version less than .5, so added a pin for minimum version of .5 in the requirements file. MNE is also throwing a future warnign for an API kwarg change in epochs.get_data, where the current default copy=False is changing to copy=True. See mne-tools/mne-python#12121 . I'm a little worried about the additional copies we will incur every single time that we call that method, but I dont have a strong reason to stray from what MNE believes is a bug fix so lets go with it and see how it plays.

* FIX, MAINT: Bumpg GH actions checkout versions

- This should resolve the core issue of the runner not being able to find the most up to date
mne_iclabel wheel.

* FIX, TST: Install torch in doc building CI

Since MNE iclabel 0.5, torch is NOT installed by default.
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