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First we extract whatever context the user supplied, then we clobber it to expand our top-level document. We still have to jump through some hoops to remove the fluree context if it is supplied, but we won't have to do that anymore once we remove the default context.
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This removes dead code and renames the top-level api functions:
stage2->stagetransact!2->transact!create-with-txn2->create-with-txnAlso propagates the api changes to our js tests, fixing #666
Currently based on #674, so that needs to be merged first.