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@njzjz njzjz commented Apr 10, 2025

Summary by CodeRabbit

  • Chores

    • Updated the testing command to ensure that console output is displayed during test runs.
  • Tests

    • Introduced automated logging of GPU memory usage after tests.
    • Standardized cleanup procedures across multiple test suites for improved resource management.
    • Adjusted teardown processes for specific test classes to enhance resource management, including new class methods for cleanup.

njzjz added 2 commits April 5, 2025 23:37
Signed-off-by: Jinzhe Zeng <jinzhe.zeng@ustc.edu.cn>
@njzjz njzjz added the Test CUDA Trigger test CUDA workflow label Apr 10, 2025
@github-actions github-actions bot added Python and removed Test CUDA Trigger test CUDA workflow labels Apr 10, 2025
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📝 Walkthrough

Walkthrough

The pull request updates the CI workflow by appending the -s flag to the pytest command, enabling printed output during test execution. It also introduces a new autouse fixture in the test configuration to log GPU memory usage after each test via the nvidia-smi command. Additionally, several test files have been updated to include a new class method (tearDownClass) in their test classes, ensuring that the superclass cleanup routine is executed after all tests in each class complete.

Changes

Files Change Summaries
.github/workflows/test_cuda.yml Updated pytest command from python -m pytest source/tests to python -m pytest -s source/tests to display print output during test execution.
source/tests/conftest.py Added new fixture log_gpu_memory (with autouse=True) that runs nvidia-smi post-test and prints GPU memory usage or error if retrieval fails.
source/tests/universal/pt/{atomc_model,descriptor,fitting,loss,model,utils}/test_*.py Added tearDownClass methods in multiple test classes to invoke PTTestCase.tearDownClass() for cleanup after all tests in each class.
source/tests/universal/dpmodel/backend.py Removed call to super().tearDownClass() in DPTestCase.tearDownClass(), altering the teardown control flow.
source/tests/universal/pt/backend.py Removed call to super().tearDownClass() in PTTestCase.tearDownClass(), altering the teardown control flow.

Sequence Diagram(s)

sequenceDiagram
    participant T as Test Case
    participant LM as log_gpu_memory Fixture
    participant NS as nvidia-smi Process

    T ->> LM: Complete test execution
    LM ->> NS: Execute `nvidia-smi` command
    NS -->> LM: Return GPU memory info or error
    LM ->> Console: Print GPU memory usage information
Loading
sequenceDiagram
    participant TC as Test Class
    participant TD as tearDownClass Method
    participant PT as PTTestCase.cleanup

    TC ->> Test Methods: Execute all test methods
    TC ->> TD: Invoke class cleanup (tearDownClass)
    TD ->> PT: Call PTTestCase.tearDownClass()
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codecov bot commented Apr 10, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 84.82%. Comparing base (13308b5) to head (fead812).
Report is 77 commits behind head on devel.

Additional details and impacted files
@@            Coverage Diff             @@
##            devel    #4702      +/-   ##
==========================================
- Coverage   84.82%   84.82%   -0.01%     
==========================================
  Files         692      692              
  Lines       66512    66513       +1     
  Branches     3539     3538       -1     
==========================================
  Hits        56419    56419              
- Misses       8952     8953       +1     
  Partials     1141     1141              

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njzjz added 2 commits April 11, 2025 15:02
This reverts commit a0faa6e.
Signed-off-by: Jinzhe Zeng <jinzhe.zeng@ustc.edu.cn>
@njzjz njzjz added the Test CUDA Trigger test CUDA workflow label Apr 11, 2025
@github-actions github-actions bot removed the Test CUDA Trigger test CUDA workflow label Apr 11, 2025
@njzjz njzjz changed the title [DEBUG] debug gc.collect [DEBUG] debug tearDownClass Apr 11, 2025
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Actionable comments posted: 0

🧹 Nitpick comments (4)
source/tests/universal/pt/atomc_model/test_atomic_model.py (2)

136-139: Good addition of tearDownClass, but consider explicit cleanup of model instances.

The addition of tearDownClass method is a good practice for proper resource cleanup. However, you might want to consider explicitly deleting class attributes like module to ensure thorough memory cleanup, similar to what's done in other backend test classes.

@classmethod
def tearDownClass(cls) -> None:
    super().tearDownClass()
+   if hasattr(cls, "module"):
+       del cls.module

206-209: Consider consistent cleanup pattern across all test classes.

These tearDownClass implementations call the super method but don't explicitly clean up model instances that could be holding onto GPU memory. For more thorough garbage collection, consider adding explicit cleanup of class attributes.

@classmethod
def tearDownClass(cls) -> None:
    super().tearDownClass()
+   # Clean up model instances to help garbage collection
+   if hasattr(cls, "module"):
+       del cls.module

Also applies to: 272-275, 338-341, 414-417, 483-486

source/tests/universal/pt/model/test_model.py (2)

214-217: Consider enhancing tearDownClass with explicit module cleanup.

The implementation correctly calls the superclass method, but similar to other test classes in this codebase (e.g., in backend.py), you should consider explicitly cleaning up class attributes to help garbage collection.

@classmethod
def tearDownClass(cls) -> None:
    super().tearDownClass()
+   if hasattr(cls, "module"):
+       del cls.module
+   if hasattr(cls, "_script_module"):
+       del cls._script_module

322-325: Ensure consistent cleanup in all tearDownClass implementations.

While adding tearDownClass methods is a step in the right direction for memory management, these implementations could be enhanced to explicitly clean up PyTorch models and tensors. This is especially important for GPU memory management.

Recommended implementation for all tearDownClass methods:

@classmethod
def tearDownClass(cls) -> None:
    super().tearDownClass()
+   # Clean up PyTorch objects to help garbage collection
+   if hasattr(cls, "module"):
+       del cls.module
+   if hasattr(cls, "_script_module"):
+       del cls._script_module

Also applies to: 421-424, 516-519, 619-622, 748-751, 846-849, 949-952

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📒 Files selected for processing (6)
  • source/tests/universal/pt/atomc_model/test_atomic_model.py (6 hunks)
  • source/tests/universal/pt/descriptor/test_descriptor.py (1 hunks)
  • source/tests/universal/pt/fitting/test_fitting.py (1 hunks)
  • source/tests/universal/pt/loss/test_loss.py (1 hunks)
  • source/tests/universal/pt/model/test_model.py (8 hunks)
  • source/tests/universal/pt/utils/test_type_embed.py (1 hunks)
🧰 Additional context used
🧬 Code Graph Analysis (5)
source/tests/universal/pt/descriptor/test_descriptor.py (4)
source/tests/universal/pt/fitting/test_fitting.py (1)
  • tearDownClass (55-56)
source/tests/universal/pt/utils/test_type_embed.py (1)
  • tearDownClass (27-28)
source/tests/universal/pt/atomc_model/test_atomic_model.py (6)
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source/tests/universal/pt/model/test_model.py (8)
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source/tests/universal/pt/fitting/test_fitting.py (4)
source/tests/universal/pt/descriptor/test_descriptor.py (1)
  • tearDownClass (61-62)
source/tests/universal/pt/utils/test_type_embed.py (1)
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source/tests/universal/pt/atomc_model/test_atomic_model.py (6)
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source/tests/universal/pt/model/test_model.py (8)
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source/tests/universal/pt/loss/test_loss.py (5)
source/tests/universal/pt/descriptor/test_descriptor.py (1)
  • tearDownClass (61-62)
source/tests/universal/pt/fitting/test_fitting.py (1)
  • tearDownClass (55-56)
source/tests/universal/pt/utils/test_type_embed.py (1)
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source/tests/universal/pt/atomc_model/test_atomic_model.py (6)
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source/tests/universal/pt/model/test_model.py (7)
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source/tests/universal/pt/model/test_model.py (7)
source/tests/universal/pt/descriptor/test_descriptor.py (1)
  • tearDownClass (61-62)
source/tests/universal/pt/fitting/test_fitting.py (1)
  • tearDownClass (55-56)
source/tests/universal/pt/loss/test_loss.py (1)
  • tearDownClass (50-51)
source/tests/universal/pt/utils/test_type_embed.py (1)
  • tearDownClass (27-28)
source/tests/universal/pt/backend.py (1)
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source/tests/universal/pt/atomc_model/test_atomic_model.py (6)
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source/tests/universal/dpmodel/backend.py (1)
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source/tests/universal/pt/atomc_model/test_atomic_model.py (7)
source/tests/universal/pt/descriptor/test_descriptor.py (1)
  • tearDownClass (61-62)
source/tests/universal/pt/fitting/test_fitting.py (1)
  • tearDownClass (55-56)
source/tests/universal/pt/loss/test_loss.py (1)
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source/tests/universal/pt/utils/test_type_embed.py (1)
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source/tests/universal/pt/backend.py (1)
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source/tests/universal/pt/model/test_model.py (8)
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source/tests/universal/dpmodel/backend.py (1)
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🔇 Additional comments (4)
source/tests/universal/pt/fitting/test_fitting.py (1)

54-56: Good addition for consistent cleanup.

Adding the tearDownClass method ensures that the superclass's cleanup procedures are properly called, which is a good practice for resource management, especially for tests involving GPU resources.

source/tests/universal/pt/utils/test_type_embed.py (1)

26-28: Good addition for consistent cleanup.

The tearDownClass method ensures proper resource cleanup after all tests in this class are completed. This is particularly important for GPU-related tests to prevent memory leaks.

source/tests/universal/pt/descriptor/test_descriptor.py (1)

60-62: Good addition for consistent cleanup.

Adding the tearDownClass method ensures proper resource cleanup, which aligns with the PR's goal of debugging garbage collection issues.

source/tests/universal/pt/loss/test_loss.py (1)

49-51: Good addition for consistent cleanup.

This tearDownClass method ensures that resources are properly cleaned up after all tests in the class have run. This is part of the systematic approach to improving garbage collection across the test suite.

@njzjz njzjz added the Test CUDA Trigger test CUDA workflow label Apr 11, 2025
@github-actions github-actions bot removed the Test CUDA Trigger test CUDA workflow label Apr 11, 2025
njzjz added 2 commits April 12, 2025 19:41
Signed-off-by: Jinzhe Zeng <jinzhe.zeng@ustc.edu.cn>
@njzjz njzjz added the Test CUDA Trigger test CUDA workflow label Apr 12, 2025
@github-actions github-actions bot removed the Test CUDA Trigger test CUDA workflow label Apr 12, 2025
Signed-off-by: Jinzhe Zeng <jinzhe.zeng@ustc.edu.cn>
@njzjz njzjz added the Test CUDA Trigger test CUDA workflow label Apr 12, 2025
@github-actions github-actions bot removed the Test CUDA Trigger test CUDA workflow label Apr 12, 2025
@njzjz njzjz added the Test CUDA Trigger test CUDA workflow label Apr 12, 2025
@github-actions github-actions bot removed the Test CUDA Trigger test CUDA workflow label Apr 12, 2025
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Actionable comments posted: 1

📜 Review details

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📒 Files selected for processing (1)
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⏰ Context from checks skipped due to timeout of 90000ms (30)
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🔇 Additional comments (1)
source/tests/universal/pt/backend.py (1)

2-2: Added garbage collection import.

The addition of the gc module is appropriate for memory management, especially in test cleanup routines.

Signed-off-by: Jinzhe Zeng <jinzhe.zeng@ustc.edu.cn>
@njzjz njzjz added the Test CUDA Trigger test CUDA workflow label Apr 13, 2025
@github-actions github-actions bot removed the Test CUDA Trigger test CUDA workflow label Apr 13, 2025
@njzjz njzjz changed the title [DEBUG] debug tearDownClass fix(tests): fix tearDownClass and release GPU memory Apr 13, 2025
@njzjz njzjz marked this pull request as ready for review April 13, 2025 15:25
@njzjz njzjz requested review from caic99 and iProzd April 13, 2025 15:26
@iProzd iProzd added this pull request to the merge queue Apr 17, 2025
Merged via the queue into deepmodeling:devel with commit a1777b7 Apr 17, 2025
61 checks passed
@njzjz njzjz added this to the v3.0.3 milestone May 21, 2025
njzjz added a commit to njzjz/deepmd-kit that referenced this pull request May 21, 2025
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit

- **Chores**
- Updated the testing command to ensure that console output is displayed
during test runs.

- **Tests**
  - Introduced automated logging of GPU memory usage after tests.
- Standardized cleanup procedures across multiple test suites for
improved resource management.
- Adjusted teardown processes for specific test classes to enhance
resource management, including new class methods for cleanup.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->

---------

Signed-off-by: Jinzhe Zeng <jinzhe.zeng@ustc.edu.cn>
(cherry picked from commit a1777b7)
njzjz added a commit to njzjz/deepmd-kit that referenced this pull request May 21, 2025
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit

- **Chores**
- Updated the testing command to ensure that console output is displayed
during test runs.

- **Tests**
  - Introduced automated logging of GPU memory usage after tests.
- Standardized cleanup procedures across multiple test suites for
improved resource management.
- Adjusted teardown processes for specific test classes to enhance
resource management, including new class methods for cleanup.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->

---------

Signed-off-by: Jinzhe Zeng <jinzhe.zeng@ustc.edu.cn>
(cherry picked from commit a1777b7)
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