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pacific: tools: ceph-objectstore-tool is able to trim solely pg log dups' entries#46631

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yuriw merged 3 commits intoceph:pacificfrom
rzarzynski:wip-pglog-trim-dups-pacific
Jun 17, 2022
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pacific: tools: ceph-objectstore-tool is able to trim solely pg log dups' entries#46631
yuriw merged 3 commits intoceph:pacificfrom
rzarzynski:wip-pglog-trim-dups-pacific

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Backport of #46630.

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This reverts commit d49ff13.
which is the in-OSD part of the fix for accumulation of `dup`
entries in a PG Log. Brainstorming it has brought questions
on the OSD's behaviour during an upgrade if there are tons of
dups in the log. What must be double-checked before bringing
it back is ensuring we chunk the deletions properly to not
impose OOMs / stalls in, to exemplify, RocksDB.

The backport ticket is: https://tracker.ceph.com/issues/55989

Signed-off-by: Radoslaw Zarzynski <rzarzyns@redhat.com>
This reverts commit 1f3fede.

Although the chunking in off-line `dups` trimming (via COT) seems
fine, the `ceph-objectstore-tool` is a client of `trim()` of
`PGLog::IndexedLog` which means than a partial revert is not
possible without extensive changes. Moreover, trimming pg log
is not enough without modifying pg_info_t accordingly which
the reverted patch lacks.

The backport ticket is: https://tracker.ceph.com/issues/55989

Signed-off-by: Radoslaw Zarzynski <rzarzyns@redhat.com>
@rzarzynski rzarzynski added this to the pacific milestone Jun 11, 2022
@rzarzynski rzarzynski requested a review from a team as a code owner June 11, 2022 23:04
The main assumption is trimming just dups doesn't need any update
to the corresponding pg_info_t.

Testing:

1. cluster without the autoscaler
```
rzarz@ubulap:~/dev/ceph/build$ MON=1 MGR=1 OSD=3 MGR=1 MDS=0 ../src/vstart.sh -l -b -n -o "osd_pg_log_dups_tracked=3000000" -o "osd_pool_default_pg_autoscale_mode=off"
```

2. 8 PGs in the testing pool.
```
rzarz@ubulap:~/dev/ceph/build$ bin/ceph osd pool create test-pool 8 8
```

3. Provisioning dups with rados bench
```
bin/rados bench -p test-pool 300 write -b 4096  --no-cleanup
...
Total time run:         300.034
Total writes made:      103413
Write size:             4096
Object size:            4096
Bandwidth (MB/sec):     1.34637
Stddev Bandwidth:       0.589071
Max bandwidth (MB/sec): 2.4375
Min bandwidth (MB/sec): 0.902344
Average IOPS:           344
Stddev IOPS:            150.802
Max IOPS:               624
Min IOPS:               231
Average Latency(s):     0.0464151
Stddev Latency(s):      0.0183627
Max latency(s):         0.0928424
Min latency(s):         0.0131932
```

4. Killing osd.0
```
rzarz@ubulap:~/dev/ceph/build$ kill 2572129 # pid of osd.0
```

5. Listing PGs on osd.0 and calculating number of pg log's entries and
dups:

```
rzarz@ubulap:~/dev/ceph/build$ bin/ceph-objectstore-tool --data-path dev/osd0 --op list-pgs --pgid 2.c > osd0_pgs.txt
rzarz@ubulap:~/dev/ceph/build$ for pgid in `cat osd0_pgs.txt`; do echo $pgid; bin/ceph-objectstore-tool --data-path dev/osd0 --op log --pgid $pgid | jq '(.pg_log_t.log|length),(.pg_log_t.dups|length)'; done
2.7
10020
3100
2.6
10100
3000
2.3
10012
2800
2.1
10049
2900
2.2
10057
2700
2.0
10027
2900
2.5
10077
2700
2.4
10072
2900
1.0
97
0
```

6. Trimming dups
```
rzarz@ubulap:~/dev/ceph/build$ CEPH_ARGS="--osd_pg_log_dups_tracked 2500 --osd_pg_log_trim_max=100" bin/ceph-objectstore-tool --data-path dev/osd0 --op trim-pg-log-dups --pgid 2.7
max_dup_entries=2500 max_chunk_size=100
Removing keys dup_0000000020.00000000000000000001 - dup_0000000020.00000000000000000100
Removing keys dup_0000000020.00000000000000000101 - dup_0000000020.00000000000000000200
Removing keys dup_0000000020.00000000000000000201 - dup_0000000020.00000000000000000300
Removing keys dup_0000000020.00000000000000000301 - dup_0000000020.00000000000000000400
Removing keys dup_0000000020.00000000000000000401 - dup_0000000020.00000000000000000500
Removing keys dup_0000000020.00000000000000000501 - dup_0000000020.00000000000000000600
Finished trimming, now compacting...
Finished trimming pg log dups
```

7. Checking number of pg log's entries and dups
```
rzarz@ubulap:~/dev/ceph/build$ for pgid in `cat osd0_pgs.txt`; do echo $pgid; bin/ceph-objectstore-tool --data-path dev/osd0 --op log --pgid $pgid | jq '(.pg_log_t.log|length),(.pg_log_t.dups|length)'; done
2.7
10020
2500
2.6
10100
3000
2.3
10012
2800
2.1
10049
2900
2.2
10057
2700
2.0
10027
2900
2.5
10077
2700
2.4
10072
2900
1.0
97
0
```

Conflicts:
        src/tools/ceph_objectstore_tool.cc -- undetected conflict
        with d5445b8. Fixed by
        adopting the patch no not require the `unique_ptr<T>::get()`.

Fixes: https://tracker.ceph.com/issues/53729
Signed-off-by: Radosław Zarzyński <rzarzyns@redhat.com>
(cherry picked from commit a2190f9)
@amathuria
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http://pulpito.front.sepia.ceph.com/yuriw-2022-06-17_13:58:31-rados-wip-yuri7-testing-2022-06-16-1051-pacific-distro-default-smithi/

Failures unrelated tracked in:

https://tracker.ceph.com/issues/56036 - timeout 3h /home/ubuntu/cephtest/clone.client.0/qa/workunits/cephadm/test_dashboard_e2e.sh
https://tracker.ceph.com/issues/53501 - Cannot find file on the remote 'ubuntu@smithi033.front.sepia.ceph.com': 'rook/cluster/examples/kubernetes/ceph/operator.yaml'
https://tracker.ceph.com/issues/53939 - UPGRADE_REDEPLOY_DAEMON: Upgrading daemon osd.0 on host smithi103 failed
https://tracker.ceph.com/issues/55443 - "SELinux denials found.." in rados run
https://tracker.ceph.com/issues/54086 - Permission denied when trying to unlink and open /var/log/ntpstats/
https://tracker.ceph.com/issues/54273 - dead jobs due to ssh connection lost on ubuntu 18.04
https://tracker.ceph.com/issues/54071 - rados/cephadm/osds: Invalid command: missing required parameter hostname()
https://tracker.ceph.com/issues/51076 - "wait_for_recovery: failed before timeout expired" during thrashosd test with EC backend.
https://tracker.ceph.com/issues/55322 - test-restful.sh: mon metadata unable to be retrieved

@yuriw
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yuriw commented Jun 17, 2022

jenkins test api

@yuriw yuriw merged commit bb5a74b into ceph:pacific Jun 17, 2022
@ljflores
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@amathuria I filed a new tracker for the wait_for_recovery assertion. It looks a littie different since the other Tracker only affected thrash-erasure-code-big tests, and this one is a thrash-erasure-code test. I'll take a look into it.

rzarzynski added a commit to rzarzynski/ceph that referenced this pull request Aug 23, 2022
… dups

This commit aggregates changes for multiple PR:

* Offline: ceph#46630
* Online: ceph#47046

* Offline fix: ceph#46706
* Online fix: ceph#47688

* Offline fix: ceph#46631
* Online fix: ceph#47701

Signed-off-by: Radoslaw Zarzynski <rzarzyns@redhat.com>
rzarzynski added a commit to rzarzynski/ceph that referenced this pull request Aug 23, 2022
… dups

This commit aggregates changes for multiple PR:

* Offline: ceph#46630
* Online: ceph#47046

* Offline fix: ceph#46706
* Online fix: ceph#47688

* Offline fix: ceph#46631
* Online fix: ceph#47701

Signed-off-by: Radoslaw Zarzynski <rzarzyns@redhat.com>
rzarzynski added a commit to rzarzynski/ceph that referenced this pull request Aug 23, 2022
… dups

This commit aggregates changes for multiple PR:

main
----
* Offline: ceph#46630
* Online: ceph#47046

quincy
------
* Offline fix: ceph#46706
* Online fix: ceph#47688

pacific
-------
* Offline fix: ceph#46631
* Online fix: ceph#47701

Signed-off-by: Radoslaw Zarzynski <rzarzyns@redhat.com>
rzarzynski added a commit to rzarzynski/ceph that referenced this pull request Aug 23, 2022
… dups

This commit aggregates changes for multiple PR:

main
----
* Offline: ceph#46630
* Online: ceph#47046

quincy
------
* Offline fix: ceph#46706
* Online fix: ceph#47688

pacific
-------
* Offline fix: ceph#46631
* Online fix: ceph#47701

Signed-off-by: Radoslaw Zarzynski <rzarzyns@redhat.com>
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6 participants