This MR contains the following updates:

| Package | Update | Change |
|---|---|---|
| [astral-sh/uv](https://github.com/astral-sh/uv) | patch | `0.5.3` -> `0.5.4` |

MR created with the help of [el-capitano/tools/renovate-bot](https://gitlab.com/el-capitano/tools/renovate-bot).

**Proposed changes to behavior should be submitted there as MRs.**

---

### Release Notes

<details>
<summary>astral-sh/uv (astral-sh/uv)</summary>

### [`v0.5.4`](https://github.com/astral-sh/uv/blob/HEAD/CHANGELOG.md#054)

[Compare Source](astral-sh/uv@0.5.3...0.5.4)

##### Enhancements

-   Accept either singular or plural values for CLI requirements ([#&#8203;9196](astral-sh/uv#9196))
-   Add `--all-groups` to `uv sync`, `uv run`, `uv export`, and `uv tree` ([#&#8203;8892](astral-sh/uv#8892))
-   Add a progress bar to `uv tree --outdated` and `uv pip list --outdated` ([#&#8203;9284](astral-sh/uv#9284))
-   Add retries for Python downloads ([#&#8203;9274](astral-sh/uv#9274))
-   Use exponential backoff for publish retries ([#&#8203;9276](astral-sh/uv#9276))
-   Add manylinux target triples up to glibc 2.40 ([#&#8203;9234](astral-sh/uv#9234))

##### Performance

-   Parallelize network requests in `uv tree --outdated` ([#&#8203;9280](astral-sh/uv#9280))
-   Use `zlib-rs` on all platforms ([#&#8203;9264](astral-sh/uv#9264))

##### Bug fixes

-   Avoid validating extra and group sources in `build-system.requires` ([#&#8203;9273](astral-sh/uv#9273))
-   Catch retries with wrapped `reqwest` errors ([#&#8203;9253](astral-sh/uv#9253))
-   Sort hashes in `uv export` output ([#&#8203;9237](astral-sh/uv#9237))
-   Strip `--index` and `--default-index` from command header ([#&#8203;9288](astral-sh/uv#9288))

##### Documentation

-   Add breadcrumbs to the documentation ([#&#8203;9242](astral-sh/uv#9242))
-   Add minimum version to PyTorch guide ([#&#8203;9247](astral-sh/uv#9247))
-   Add support for anchor redirects with client-side js ([#&#8203;9212](astral-sh/uv#9212))
-   Improve content on project configuration ([#&#8203;9235](astral-sh/uv#9235))
-   Improve the project creation documentation ([#&#8203;9236](astral-sh/uv#9236))
-   Move the integration guides into the "Guides" section as a collapsed group ([#&#8203;9245](astral-sh/uv#9245))
-   Reorganize the project concept documentation ([#&#8203;9121](astral-sh/uv#9121))
-   Use the full screen height for the main content to stabilize the nav ([#&#8203;9153](astral-sh/uv#9153))

##### Error messages

-   Add dedicated warning for empty stdin ([#&#8203;9256](astral-sh/uv#9256))

</details>

---

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This MR has been generated by [Renovate Bot](https://github.com/renovatebot/renovate).
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After investigating gemini-code-assist review feedback, determined that
--all-groups is actually valid and preferable:

- `uv sync --all-groups` was added in uv 0.5.4 (Nov 2024)
- See: astral-sh/uv#8892
- It's cleaner, matches setup-environment.sh, and is more maintainable
- Added clarifying comments "(dev and docs)" to show what groups exist

Changes kept from previous commit (df36f34):
✅ Fix pytest -m slow marker syntax (was incorrectly --run-slow)
✅ Use relative path doctk/ instead of /home/user/doctk/
✅ Fix markdown.py typo in writers directory (was markdown.md)
✅ Add missing imports to code example (Callable, Document, Node, Operation)

Changes reverted:
↩️  Restore --all-groups instead of --group dev --group docs

The explicit --group syntax was the reviewer's suggestion, but --all-groups
is simpler, matches actual implementation, and is now well-established.