Skip to content
View agrima2010's full-sized avatar

Highlights

  • Pro

Block or report agrima2010

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
agrima2010/README.md

🧬 Agrima Bhatt

Bioinformatician · Data/ML/AI · Genomics Enthusiast

LinkedIn GitHub Email


🚀 About Me

I'm a Bioinformatics Developer passionate about turning complex biological data into actionable insights. I work at the intersection of genomics, data science, and machine learning. Building scalable pipelines that power modern life sciences research.

  • 🔬 Working with Next-Generation Sequencing Data, training ML models, and Developing QC pipelines
  • ⚡ Building reproducible, scalable workflows on HPC environments
  • 🤖 Applying ML/AI to biological sequence data
  • 🌱 Always learning! Currently diving deeper into nf-core and cloud-based bioinformatics

🛠️ Tech Stack

Languages

Python R Bash Nextflow

Infrastructure

Linux HPC Git


🧪 Featured Projects

Contributed to a National Genomics Infrastructure technical note on Oxford Nanopore Technology single-cell RNA sequencing workflows. Built with Jupyter Notebook for reproducible analysis.

A QC pipeline built with Nextflow to inspect and validate sequencing data. Forked and extended from nf-core with custom enhancements.


💡 What I'm Looking For

I'm open to bioinformatics, data science, or ML engineering roles where I can:

  • Build and optimize computational pipelines
  • Apply AI/ML to genomics or life sciences data
  • Work with cross-functional teams across biology and engineering

Let's connect and build something impactful together.

LinkedIn

Popular repositories Loading

  1. NGI-ONT_scRNAseq-tech_note-2025 NGI-ONT_scRNAseq-tech_note-2025 Public

    Forked from NationalGenomicsInfrastructure/NGI-ONT_scRNAseq-tech_note-2025

    Jupyter Notebook

  2. seqinspector seqinspector Public

    Forked from nf-core/seqinspector

    QC pipeline to inspect your sequences_abh

    Nextflow

  3. configs configs Public

    Forked from nf-core/configs

    Config files used to define parameters specific to compute environments at different Institutions

    Nextflow

  4. bertax_training bertax_training Public

    Forked from rnajena/bertax_training

    Training scripts for BERTax

    Python

  5. agrima2010 agrima2010 Public

    Hello World!

  6. bertax bertax Public

    Forked from rnajena/bertax

    Taxonomic classification of DNA sequences

    Python