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Eq. for EulerianPT calculator#1073

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damonge merged 4 commits intov3_wipfrom
eq_nlpt
Apr 19, 2023
Merged

Eq. for EulerianPT calculator#1073
damonge merged 4 commits intov3_wipfrom
eq_nlpt

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@damonge damonge commented Apr 19, 2023

This implements comparison between PT calculators beyond id.
The tracers seem to me to be complicated enough that the only practical and safe comparison is via id equality.

@damonge damonge changed the base branch from master to v3_wip April 19, 2023 09:59
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biases and type uniquely define a tracer, right? Why not use that as an equivalence check? Very easy. Granted, because of the interp objects this will end up doing id checking in the background, but at some point we might implement __eq__ for interpolators too.

Also, now that I am looking at it again, the tracer base class should be abstract, since type is undefined. Make this an abstract property with

@property
@abstractmethod
def type(self):
   """Docstring."""

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damonge commented Apr 19, 2023

OK, done (although it seems a bit silly, since this is effectively a slower way of just checking ids atm)

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Ok good, you just need to delete the test that fails. I'm approving either way.

@damonge damonge merged commit fa4b977 into v3_wip Apr 19, 2023
@damonge damonge deleted the eq_nlpt branch April 19, 2023 14:27
@nikfilippas nikfilippas mentioned this pull request Apr 20, 2023
34 tasks
damonge added a commit that referenced this pull request May 3, 2023
* halo profiles in their own directory

* concentrations in their own directory

* mass functions & halo biases in their own directory

* moved CIB stuff to profiles & 2pts

* split halo model into 1/2/4-pt

* fix imports

* remove empty module

* fix typo

* Baryons in v3 (#1039)

* Added new baryons module that will deprecate old BCM

* Tracers v3 (#1040)

* Tracers in V3

* Background, boltzmann, and cls in v3 (#1041)

* Background, boltzmann and cls in v3

* Covariances in v3 (#1046)

* Covariances in V3

* Correlations v3 (#1042)

* Correlations in v3

* split base.py and restructured into its own dir to simplify

* Neutrinos, parameters, power in v3 (#1047)

* done

* Make `T_ncdm` a cosmological parameter + (v3) (#1049)

* first commit

* rename TNCDM to T_ncdm but preserve API

* T_CMB directly into cosmo struct

* Omega_g in ccl_parameters_create; no split between C/Python

* physical_constants.T_CMB doesn't mutate anymore!

* force mutate T_CMB in benchmarks

* define defaults on instantiation just in case constants mutate

* A_s & sigma8: don't play with numbers

* simplify

* remove leftover mallocs

* temporarily preserve API for CCLv3

* Unfreeze option for `physical_constants` (#1050)

* first commit

* update rtd

* addressed comments 1

* Remove `T_CMB` and `T_ncdm` as constants (reloaded) (#1058)

* first commit

* OmNuh2 fix

* addressed comments

* keep only massive

* first step

* temp commit

* debug neutrinos & deprecate Omnuh2

* ccl_omega_x & ccl_Omeganuh2 consistency

---------

Co-authored-by: David Alonso <dam.phys@gmail.com>

* RTD: Removed The Docs

---------

Co-authored-by: David Alonso <dam.phys@gmail.com>

* flaked

---------

Co-authored-by: Nick Koukoufilippas <nikfilippas@gmail.com>

* Pk2D and Tk3D in v3 (#1048)

* tk3d and pk2d in v3

---------

Co-authored-by: Nick Koukoufilippas <nikfilippas@gmail.com>

* PT biases in v3 (#1056)

* New PT bias framework

* Halos v3 (#1043)

* ported changes in halos/profiles

* changes from star in halos/ (no tests)

* refactor concentration, mass_function, halo_bias; improvements in HMCalculator

* HaloProfile subclasses & HaloProfile.normprof attribute

* simplify imports

* remove HaloProfile.name

* cleaned up pk_Npt

* add extrap_pk argument

* FFTLogParams class instead of dictionary in HaloProfile

* simplified code

* removed mass_def from HMIngredients; comprehensive code review 1

* re-implementation, bugfixes, tests

* c_m_relation >> concentration; code improvements; A_SPLINE_MAX in Python

* HMIngredients initializers - no repeated code

* rogue file

* patch for new changes

* updated Build Status badge website

* fix websites

* added a DOI badge & links

* added nonbreaking space

* removed extra space

* FancyRepr out of CCLObject to simplify

* update tests to match changes

* coverage

* simple test for tkkssc

* more tests for tkkssc

* addressed comments 1

* addressed comments 2: mass_def defaults are name strings etc.

* deprecate Gaussian & PowerLaw profiles

* bugfix in master: sometimes mass_def_strict=False fails unexpectedly

* typo

* addressed comments

* New feature: Arbitrary function for profile normalization

* gain efficiency

* comments + deprecate k_min from HMCalculator

* renamed initialize_from_input --> create_instance

* brought in CCLNamedClass from docs_v3

* brought in from docs_v3: directly callable HMIngredients

* prep for Davids input

* renamed HMCalculator --> HaloModel

* fix typo

* brought in from docs_v3: initialize mass_def from any string (e.g. 400c)

* Revert "renamed HMCalculator --> HaloModel"

This reverts commit 43591ce.

* counterterms func inside of 4pt func

* replace deprecated abstractproperty

* abstract linked methods for HaloProfile, MassFunc, HaloBias, Concentration

* fully working implementation

* renamed lM --> log10M etc.

* minor cosmetic fix

* alternative way to include linked abstract methods and declare the template methods

* reorder

* even simpler

* bring back eq_attrs

* r -> r_t

* Additional halos features (#1068)

* first commit

* enclose classmethods in the class

* brought in minor improvements to halos

* coverage

* Tests v3 (#1059)

* ported changes in halos/profiles

* changes from star in halos/ (no tests)

* refactor concentration, mass_function, halo_bias; improvements in HMCalculator

* HaloProfile subclasses & HaloProfile.normprof attribute

* simplify imports

* remove HaloProfile.name

* cleaned up pk_Npt

* add extrap_pk argument

* FFTLogParams class instead of dictionary in HaloProfile

* simplified code

* removed mass_def from HMIngredients; comprehensive code review 1

* re-implementation, bugfixes, tests

* c_m_relation >> concentration; code improvements; A_SPLINE_MAX in Python

* HMIngredients initializers - no repeated code

* rogue file

* patch for new changes

* updated Build Status badge website

* fix websites

* added a DOI badge & links

* added nonbreaking space

* removed extra space

* FancyRepr out of CCLObject to simplify

* update tests to match changes

* coverage

* simple test for tkkssc

* more tests for tkkssc

* addressed comments 1

* addressed comments 2: mass_def defaults are name strings etc.

* deprecate Gaussian & PowerLaw profiles

* remove all warnings in testing

* use pytest as per docs instead of numpy.testing and pyutils.assert_warns

* bugfix in master: sometimes mass_def_strict=False fails unexpectedly

* typo

* addressed comments

* New feature: Arbitrary function for profile normalization

* gain efficiency

* comments + deprecate k_min from HMCalculator

* renamed initialize_from_input --> create_instance

* brought in CCLNamedClass from docs_v3

* brought in from docs_v3: directly callable HMIngredients

* prep for Davids input

* renamed HMCalculator --> HaloModel

* fix typo

* brought in from docs_v3: initialize mass_def from any string (e.g. 400c)

* Revert "renamed HMCalculator --> HaloModel"

This reverts commit 43591ce.

* comments

* comments

* shortcut for __eq__ methods

* Eq. for EulerianPT calculator (#1073)

* __eq_attrs__ for nl_pt

* No normprof (#1072)

* extricated normprof

* Cosmology v3 (#1071)

* rename core --> Cosmology

* renamed core --> cosmology in docs/imports except docstrings

* cosmology v2

* first pass

* neutrinosneutrinosneutrinos

* simplified

* yamlyamlyaml

* fully fix neutrino mayhem

* new arg names in tests

* comments

* comments on comments on comments

* removed tests

* no warn

---------

Co-authored-by: David Alonso <dam.phys@gmail.com>

* avoid warning due to zeros (#1076)

* Fix halo inconsistencies v3 (#1069)

* ported changes in halos/profiles

* changes from star in halos/ (no tests)

* refactor concentration, mass_function, halo_bias; improvements in HMCalculator

* HaloProfile subclasses & HaloProfile.normprof attribute

* simplify imports

* remove HaloProfile.name

* cleaned up pk_Npt

* add extrap_pk argument

* FFTLogParams class instead of dictionary in HaloProfile

* simplified code

* removed mass_def from HMIngredients; comprehensive code review 1

* re-implementation, bugfixes, tests

* c_m_relation >> concentration; code improvements; A_SPLINE_MAX in Python

* HMIngredients initializers - no repeated code

* rogue file

* patch for new changes

* updated Build Status badge website

* fix websites

* added a DOI badge & links

* added nonbreaking space

* removed extra space

* FancyRepr out of CCLObject to simplify

* update tests to match changes

* coverage

* simple test for tkkssc

* more tests for tkkssc

* addressed comments 1

* addressed comments 2: mass_def defaults are name strings etc.

* deprecate Gaussian & PowerLaw profiles

* bugfix in master: sometimes mass_def_strict=False fails unexpectedly

* typo

* addressed comments

* New feature: Arbitrary function for profile normalization

* gain efficiency

* comments + deprecate k_min from HMCalculator

* renamed initialize_from_input --> create_instance

* brought in CCLNamedClass from docs_v3

* brought in from docs_v3: directly callable HMIngredients

* prep for Davids input

* renamed HMCalculator --> HaloModel

* fix typo

* brought in from docs_v3: initialize mass_def from any string (e.g. 400c)

* Revert "renamed HMCalculator --> HaloModel"

This reverts commit 43591ce.

* counterterms func inside of 4pt func

* replace deprecated abstractproperty

* abstract linked methods for HaloProfile, MassFunc, HaloBias, Concentration

* fully working implementation

* renamed lM --> log10M etc.

* minor cosmetic fix

* first commit

* alternative way to include linked abstract methods and declare the template methods

* reorder

* even simpler

* enclose classmethods in the class

* brought in minor improvements to halos

* clone of 1064

* bring back eq_attrs

* r -> r_t

* Additional halos features (#1068)

* first commit

* enclose classmethods in the class

* brought in minor improvements to halos

* coverage

* removed MassConcentration

* full implementation (v3 only)

* comments

* single-liner

* coverage

* Final checklist v3 (#1075)

* imports

* homogenize all imports as per PEP8 and the Python Import System

* homogenize all imports as per PEP8 and the Python Import System

* instance checks

* all exceptions raised correctly

* comments

* add aliases

* reverted changes and introduced proper enums

* Preserve API in v2.final (#1077)

* first commit

* Einasto mass translator + MassDef concentration API

* universal api no-break

* comments

* MassDef vars

* Coverage v3 (#1078)

* coverage

* comments

---------

Co-authored-by: David Alonso <dam.phys@gmail.com>
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