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Exception when importing arXiv entries (commons logging module error) #11401

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#11403
Closed
Exception when importing arXiv entries (commons logging module error)#11401
#11403
@ytzemih

Description

@ytzemih
ytzemih
opened on Jun 20, 2024

JabRef version

Latest development branch build (please note build date below)

Operating system

GNU / Linux

Details on version and operating system

No response

Checked with the latest development build (copy version output from About dialog)

  • I made a backup of my libraries before testing the latest development version.
  • I have tested the latest development version and the problem persists

Steps to reproduce the behaviour

  1. Push "Add specific entry" button.
  2. Select "arXiv" and enter arXiv ID and press Ok
  3. An exception is thrown, see below
  4. But the entry is at least created, however, hard to tell whether everything is done correctly.

Appendix

Log File 
java.lang.IllegalAccessError: class org.apache.http.conn.ssl.AbstractVerifier (in module org.jabref.merged.module) cannot access class org.apache.commons.logging.LogFactory (in module org.apache.commons.logging) because module org.jabref.merged.module does not read module org.apache.commons.logging
	at org.jabref.merged.module@5.14.191/org.apache.http.conn.ssl.AbstractVerifier.<init>(Unknown Source)
	at org.jabref.merged.module@5.14.191/org.apache.http.conn.ssl.AllowAllHostnameVerifier.<init>(Unknown Source)
	at org.jabref.merged.module@5.14.191/org.apache.http.conn.ssl.AllowAllHostnameVerifier.<clinit>(Unknown Source)
	at org.jabref.merged.module@5.14.191/org.apache.http.conn.ssl.SSLConnectionSocketFactory.<clinit>(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.apache.SecurityConfig.createDefaultRegistry(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.apache.SecurityConfig.buildSocketFactory(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.apache.SecurityConfig.createManager(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.apache.ApacheClient.<init>(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.apache.ApacheClient$Builder.lambda$apply$2(Unknown Source)
	at java.base/java.util.Optional.orElseGet(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.apache.ApacheClient$Builder.apply(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.apache.ApacheClient$Builder.apply(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.Config.buildClient(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.Config.getClient(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.BaseRequest.request(Unknown Source)
	at org.jabref.merged.module@5.14.191/kong.unirest.BaseRequest.asString(Unknown Source)
	at org.jabref@5.14.191/org.jabref.logic.net.URLDownload.canBeReached(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.linkedfile.DownloadLinkedFileAction.checkSSLHandshake(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.linkedfile.DownloadLinkedFileAction.execute(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.fieldeditors.LinkedFileViewModel.download(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.externalfiles.ImportHandler.lambda$downloadLinkedFiles$0(Unknown Source)
	at java.base/java.util.stream.ForEachOps$ForEachOp$OfRef.accept(Unknown Source)
	at java.base/java.util.stream.ReferencePipeline$2$1.accept(Unknown Source)
	at java.base/java.util.ArrayList$ArrayListSpliterator.forEachRemaining(Unknown Source)
	at java.base/java.util.stream.AbstractPipeline.copyInto(Unknown Source)
	at java.base/java.util.stream.AbstractPipeline.wrapAndCopyInto(Unknown Source)
	at java.base/java.util.stream.ForEachOps$ForEachOp.evaluateSequential(Unknown Source)
	at java.base/java.util.stream.ForEachOps$ForEachOp$OfRef.evaluateSequential(Unknown Source)
	at java.base/java.util.stream.AbstractPipeline.evaluate(Unknown Source)
	at java.base/java.util.stream.ReferencePipeline.forEach(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.externalfiles.ImportHandler.downloadLinkedFiles(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.externalfiles.ImportHandler.importEntryWithDuplicateCheck(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.externalfiles.ImportHandler.importEntryWithDuplicateCheck(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.entrytype.EntryTypeViewModel.lambda$runFetcherWorker$4(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventUtil.fireEventImpl(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventUtil.fireEvent(Unknown Source)
	at javafx.base@22.0.1/javafx.event.Event.fireEvent(Unknown Source)
	at javafx.graphics@22.0.1/javafx.concurrent.EventHelper.fireEvent(Unknown Source)
	at javafx.graphics@22.0.1/javafx.concurrent.Task.fireEvent(Unknown Source)
	at javafx.graphics@22.0.1/javafx.concurrent.Task.setState(Unknown Source)
	at javafx.graphics@22.0.1/javafx.concurrent.Task$TaskCallable.lambda$call$1(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.javafx.application.PlatformImpl.lambda$runLater$10(Unknown Source)
	at java.base/java.security.AccessController.doPrivileged(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.javafx.application.PlatformImpl.lambda$runLater$11(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.glass.ui.InvokeLaterDispatcher$Future.run(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.glass.ui.gtk.GtkApplication.enterNestedEventLoopImpl(Native Method)
	at javafx.graphics@22.0.1/com.sun.glass.ui.gtk.GtkApplication._enterNestedEventLoop(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.glass.ui.Application.enterNestedEventLoop(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.glass.ui.EventLoop.enter(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.javafx.tk.quantum.QuantumToolkit.enterNestedEventLoop(Unknown Source)
	at javafx.graphics@22.0.1/javafx.stage.Stage.showAndWait(Unknown Source)
	at javafx.controls@22.0.1/javafx.scene.control.HeavyweightDialog.showAndWait(Unknown Source)
	at javafx.controls@22.0.1/javafx.scene.control.Dialog.showAndWait(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.JabRefDialogService.showCustomDialogAndWait(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.importer.NewEntryAction.execute(Unknown Source)
	at org.jabref@5.14.191/org.jabref.gui.actions.JabRefAction.lambda$new$1(Unknown Source)
	at org.jabref.merged.module@5.14.191/org.controlsfx.control.action.Action.handle(Unknown Source)
	at org.jabref.merged.module@5.14.191/org.controlsfx.control.action.Action.handle(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.CompositeEventDispatcher.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventUtil.fireEventImpl(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventUtil.fireEvent(Unknown Source)
	at javafx.base@22.0.1/javafx.event.Event.fireEvent(Unknown Source)
	at javafx.graphics@22.0.1/javafx.scene.Node.fireEvent(Unknown Source)
	at javafx.controls@22.0.1/javafx.scene.control.Button.fire(Unknown Source)
	at javafx.controls@22.0.1/com.sun.javafx.scene.control.behavior.ButtonBehavior.mouseReleased(Unknown Source)
	at javafx.controls@22.0.1/com.sun.javafx.scene.control.inputmap.InputMap.handle(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.CompositeEventHandler$NormalEventHandlerRecord.handleBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.CompositeEventDispatcher.dispatchBubblingEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventUtil.fireEventImpl(Unknown Source)
	at javafx.base@22.0.1/com.sun.javafx.event.EventUtil.fireEvent(Unknown Source)
	at javafx.base@22.0.1/javafx.event.Event.fireEvent(Unknown Source)
	at javafx.graphics@22.0.1/javafx.scene.Scene$MouseHandler.process(Unknown Source)
	at javafx.graphics@22.0.1/javafx.scene.Scene.processMouseEvent(Unknown Source)
	at javafx.graphics@22.0.1/javafx.scene.Scene$ScenePeerListener.mouseEvent(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.javafx.tk.quantum.GlassViewEventHandler$MouseEventNotification.run(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.javafx.tk.quantum.GlassViewEventHandler$MouseEventNotification.run(Unknown Source)
	at java.base/java.security.AccessController.doPrivileged(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.javafx.tk.quantum.GlassViewEventHandler.lambda$handleMouseEvent$2(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.javafx.tk.quantum.QuantumToolkit.runWithoutRenderLock(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.javafx.tk.quantum.GlassViewEventHandler.handleMouseEvent(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.glass.ui.View.handleMouseEvent(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.glass.ui.View.notifyMouse(Unknown Source)
	at javafx.graphics@22.0.1/com.sun.glass.ui.gtk.GtkApplication._runLoop(Native Method)
	at javafx.graphics@22.0.1/com.sun.glass.ui.gtk.GtkApplication.lambda$runLoop$10(Unknown Source)
	at java.base/java.lang.Thread.run(Unknown Source)

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