Description

Clean the development folder

Requirements

• Siemens_ConcatenateNIfTI.m we probably don't need this one anymore? @jan-petr
  -> HM says: this was a function that I created in the past, I think you also wrote something like this
  -> Jan: Yes, we have concatenation as part of the import, and more robust than this version.
• Can be moved to CustomScript/ExploreASLLegacy: BIDS_createTemplatesImportConfig.m, xASL_im_TestDummyNIfTIOrientation.m
  -> HM says: good idea
• Old import can be moved to CustomScript/ExploreASLLegacy: xASL_ImportFull.m
  -> HM says: yes
• Config files for old studies are moved to CustomScript/ExploreASLLegacy
  -> HM says: why not a separate folder CustomScript/StudyConfigs
• Can be moved to CustomScript/ExploreASLLegacy: xASL_io_ConvertNiiGz2Mat.m.? Do you agree? @MichaelStritt
  -> HM says: no this function is needed for the creation of new atlases.
  -> Agree. New category of development functions #1073
• Can be moved to CustomScript/ExploreASLLegacy: QualityControl/xASL_qc_TestExploreASL_HM.m
  -> HM says: Yes good idea
• Can be moved to CustomScript/ExploreASLLegacy: xASL_spm_jobman.m? JAN: I have checked it and it is not used anywhere, so lets move it. Do you agree? @HenkMutsaerts
  -> HM says: I think I wrote this for running spm jobman deployed, but if we don't use it then it can go to CustomScript/ExploreASLLegacy indeed
• UnitTest_xASL_io_DcmtkRead.m I wrote this for Jan to test xASL_io_DcmtkRead, but he didn't check it out. Can we delete it? JAN: IMHO, lets delete this as we use DcmtkRead actively in import and that's a super robust test on 50+ flavors that it works.
  -> HM says: this function iterates across multiple DICOMs and their fields and compares them between Matlab's dicominfo and xASL_io_DcmtkRead
• /Functions/Administration/xASL_adm_DocCrawler.m -> /Functions/Development/xASL_dev_DocCrawler.m
/Functions/Administration/xASL_adm_DocInitialize.m -> /Functions/Development/ xASL_dev_DocInitialize.m
  (and other docu functions)
  -> Agree. New category of development functions #1073

-> HM says: As discussed, we create a new folder /Functions/Development, where functions live with the prefix xASL_dev_*, e.g. xASL_dev_ConvertNiiGz2Mat.m. These are functions that aren't used in the pipeline and that developers use to improve the pipeline.
-> Agree. #1073

Release notes

Cleaned unused functions in the Development folder.