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Bug fix for NEURON wheel creation#1245

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pramodk merged 5 commits into
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pramodk/nmodl-neuron-wheel-fix
Apr 25, 2024
Merged

Bug fix for NEURON wheel creation#1245
pramodk merged 5 commits into
masterfrom
pramodk/nmodl-neuron-wheel-fix

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@pramodk

@pramodk pramodk commented Apr 23, 2024

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  • when neuron is built with nmodl then nmodl related files should be installed in <prefix>/ and not in <prefix>/nmodl/.data
    • <prefix>/nmodl/.data is used when we build standalone wheels
  • add one mod file using sparse solver - nmodl will automatically use sympy solver

This was the root cause for neuronsimulator/nrn/issues/2494!

- when neuron is built with nmodl then nmodl related files
  should be installed in <prefix>/ and not in <prefix>/nmodl/.data
- <prefix>/nmodl/.data is used when we build standalone wheels
- add one mod file using sparse solver - nmodl will automatically
  use sympy solver
@pramodk pramodk requested a review from alkino April 23, 2024 19:59
@pramodk pramodk force-pushed the pramodk/nmodl-neuron-wheel-fix branch from f87365b to 7a0cae7 Compare April 23, 2024 20:21

@nrnhines nrnhines left a comment

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LGTM

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codecov-commenter commented Apr 23, 2024

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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 86.67%. Comparing base (8eb88e4) to head (001673a).

Additional details and impacted files
@@            Coverage Diff             @@
##           master    #1245      +/-   ##
==========================================
+ Coverage   86.50%   86.67%   +0.16%     
==========================================
  Files         176      176              
  Lines       13176    13176              
==========================================
+ Hits        11398    11420      +22     
+ Misses       1778     1756      -22     

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

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Logfiles from GitLab pipeline #207353 (:white_check_mark:) have been uploaded here!

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@pramodk

pramodk commented Apr 25, 2024

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@pramodk pramodk merged commit 2fb037e into master Apr 25, 2024
@pramodk pramodk deleted the pramodk/nmodl-neuron-wheel-fix branch April 25, 2024 05:25
JCGoran pushed a commit to neuronsimulator/nrn that referenced this pull request Mar 12, 2025
- when neuron is built with nmodl then nmodl related files
  should be installed in <prefix>/ and not in <prefix>/nmodl/.data
- <prefix>/nmodl/.data is used when we build standalone wheels
- add one mod file using sparse solver - nmodl will automatically
  use sympy solver

NMODL Repo SHA: BlueBrain/nmodl@2fb037e
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5 participants