Skip to main content
Log in

Automatic future remnant segmentation in liver resection planning

  • Original Article
  • Published:
International Journal of Computer Assisted Radiology and Surgery Aims and scope Submit manuscript

Abstract

Purpose

Liver resection is a complex procedure requiring precise removal of tumors while preserving viable tissue. This study proposes a novel approach for automated liver resection planning, using segmentations of the liver, vessels, and tumors from CT scans to predict the future liver remnant (FLR), aiming to improve pre-operative planning accuracy and patient outcomes.

Methods

This study evaluates deep convolutional and Transformer-based networks under various computational setups. Using different combinations of anatomical and pathological delineation masks, we assess the contribution of each structure. The method is initially tested with ground-truth masks for feasibility and later validated with predicted masks from a deep learning model.

Results

The experimental results highlight the crucial importance of incorporating anatomical and pathological masks for accurate FLR delineation. Among the tested configurations, the best performing model achieves an average Dice score of approximately 0.86, aligning closely with the inter-observer variability reported in the literature. Additionally, the model achieves an average symmetric surface distance of 0.95 mm, demonstrating its precision in capturing fine-grained structural details critical for pre-operative planning.

Conclusion

This study highlights the potential for fully-automated FLR segmentation pipelines in liver pre-operative planning. Our approach holds promise for developing a solution to reduce the time and variability associated with manual delineation. Such method can provide better decision-making in liver resection planning by providing accurate and consistent segmentation results. Future studies should explore its seamless integration into clinical workflows.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+
from €37.37 /Month
  • Starting from 10 chapters or articles per month
  • Access and download chapters and articles from more than 300k books and 2,500 journals
  • Cancel anytime
View plans

Buy Now

Price includes VAT (Netherlands)

Instant access to the full article PDF.

Fig. 1
The alternative text for this image may have been generated using AI.
Fig. 2
The alternative text for this image may have been generated using AI.
Fig. 3
The alternative text for this image may have been generated using AI.
Fig. 4
The alternative text for this image may have been generated using AI.

Similar content being viewed by others

Notes

  1. Colorectal Liver Metastases Dataset.

References

  1. Martin J, Petrillo A, Smyth EC, Shaida N, Khwaja S, Cheow H, Duckworth A, Heister P, Praseedom R, Jah A, Balakrishnan A, Harper S, Liau S, Kosmoliaptsis V, Huguet E (2020) Colorectal liver metastases: current management and future perspectives. World J Clin Oncol 11(10):761–808. https://doi.org/10.5306/wjco.v11.i10.761

    Article  PubMed  PubMed Central  Google Scholar 

  2. Patel RK, Rahman S, Schwantes IR, Bartlett A, Eil R, Farsad K, Fowler K, Goodyear SM, Hansen L, Kardosh A, Nabavizadeh N, Rocha FG, Tsikitis VL, Wong MH, Mayo SC (2023) Updated management of colorectal cancer liver metastases: scientific advances driving modern therapeutic innovations. Cell Mol Gastroenterol Hepatol 16(6):881–894. https://doi.org/10.1016/j.jcmgh.2023.08.012

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Joskowicz L, Cohen D, Caplan N, Sosna J (2018) Inter-observer variability of manual contour delineation of structures in ct. Eur Radiol 29(3):1391–1399. https://doi.org/10.1007/s00330-018-5695-5

    Article  PubMed  Google Scholar 

  4. Gupta Aashish C., Cazoulat Guillaume, Al Taie Mais, Yedururi Sireesha, Rigaud Bastien, Castelo Austin, Wood John, Yu Cenji, O’Connor Caleb, Salem Usama, Silva Jessica Albuquerque Marques, Jones Aaron Kyle, McCulloch Molly, Odisio Bruno C., Koay Eugene J., Brock Kristy K. (2024) Fully automated deep learning based auto-contouring of liver segments and spleen on contrast-enhanced CT images. Sci Rep. https://doi.org/10.1038/s41598-024-53997-y

    Article  PubMed  PubMed Central  Google Scholar 

  5. Conze P-H, Andrade-Miranda G, Singh VK, Jaouen V, Visvikis D (2023) Current and emerging trends in medical image segmentation with deep learning. IEEE Trans Radiat Plasma Med Sci 7(6):545–569. https://doi.org/10.1109/TRPMS.2023.3265863

    Article  Google Scholar 

  6. Conze P-H, Kavur AE, Cornec-Le Gall E, Gezer NS, Le Meur Y, Selver MA, Rousseau F (2021) Abdominal multi-organ segmentation with cascaded convolutional and adversarial deep networks. Artif Intell Med 117:102109. https://doi.org/10.1016/j.artmed.2021.102109

    Article  PubMed  Google Scholar 

  7. Ma J, Zhang Y, Gu S, An X, Wang Z, Ge C, Wang C, Zhang F, Wang Y, Xu Y et al (2022) Fast and low-GPU-memory abdomen CT organ segmentation: the FLARE challenge. Med Image Anal 82:102616

    Article  PubMed  Google Scholar 

  8. Messaoudi H, Belaid A, Ben Salem D, Conze P-H (2023) Cross-dimensional transfer learning in medical image segmentation with deep learning. Med Image Anal 88:102868. https://doi.org/10.1016/j.media.2023.102868

    Article  PubMed  Google Scholar 

  9. Han X, Wu X, Wang S, Xu L, Xu H, Zheng D, Yu N, Hong Y, Yu Z, Yang D, Yang Z (2022) Automated segmentation of liver segment on portal venous phase MR images using a 3D convolutional neural network. Insights Imaging. https://doi.org/10.1186/s13244-022-01163-1

    Article  PubMed  PubMed Central  Google Scholar 

  10. Xie T, Li Y, Lin Z, Liu X, Zhang X, Zhang Y, Zhang D, Cheng G, Wang X (2023) Deep learning for fully automated segmentation and volumetry of couinaud liver segments and future liver remnants shown with CT before major hepatectomy: a validation study of a predictive model. Quant Imaging Med Surg 13(5):3088–3103. https://doi.org/10.21037/qims-22-1008

    Article  PubMed  PubMed Central  Google Scholar 

  11. Le DC, Chansangrat J, Keeratibharat N, Horkaew P (2021) Functional segmentation for preoperative liver resection based on hepatic vascular networks. IEEE Access 9:15485–15498. https://doi.org/10.1109/access.2021.3053384

    Article  Google Scholar 

  12. Ronneberger O, Fischer P, Brox T (2015) U-net: Convolutional networks for biomedical image segmentation. CoRR arxiv: 1505.04597

  13. Hatamizadeh A, Tang Y, Nath V, Yang D, Myronenko A, Landman B, Roth HR, Xu D (2022) Unetr: Transformers for 3d medical image segmentation. In: 2022 IEEE/CVF Winter Conference on Applications of Computer Vision (WACV), pp. 1748–1758. IEEE Computer Society, Los Alamitos, CA, USA. https://doi.org/10.1109/WACV51458.2022.00181

  14. Hatamizadeh A, Nath V, Tang Y, Yang D, Roth HR, Xu D (2022) Swin unetr: Swin transformers for semantic segmentation of brain tumors in MRI images. In: Crimi A, Bakas S (eds) Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries. Springer, Cham, pp 272–284

    Chapter  Google Scholar 

  15. Tan M, Le Q (2019) EfficientNet: Rethinking model scaling for convolutional neural networks. In: Chaudhuri, K., Salakhutdinov, R. (eds.) International Conference on Machine Learning. Proceedings of Machine Learning Research, vol. 97, pp. 6105–6114. https://proceedings.mlr.press/v97/tan19a.html

  16. Nam H, Kim H-E (2018) Batch-instance normalization for adaptively style-invariant neural networks. In: Advances in Neural Information Processing Systems, vol. 31

  17. Huang G, Sun Y, Liu Z, Sedra D, Weinberger KQ (2016) Deep networks with stochastic depth. In: European Conference on Computer Vision, pp. 646–661

  18. Simpson AL, Peoples J, Creasy JM, Fichtinger G, Gangai N, Lasso A, Keshava Murthy KN, Shia J, D’Angelica MI, Do RKG (2023) Preoperative CT and Survival Data for Patients Undergoing Resection of Colorectal Liver Metastases. The Cancer Imaging Archive. https://doi.org/10.7937/QXK2-QG03 . https://wiki.cancerimagingarchive.net/x/TIBPBQ

  19. Simpson AL, Doussot A, Creasy JM, Adams LB, Allen PJ, DeMatteo RP, Gönen M, Kemeny NE, Kingham TP, Shia J et al (2017) Computed tomography image texture: a noninvasive prognostic marker of hepatic recurrence after hepatectomy for metastatic colorectal cancer. Ann Surg Oncol 24:2482–2490

    Article  PubMed  PubMed Central  Google Scholar 

  20. Bilic P, Christ P, Li HB, Vorontsov E, Ben-Cohen A, Kaissis G, Szeskin A, Jacobs C, Mamani GEH, Chartrand G et al (2023) The liver tumor segmentation benchmark (lits). Med Image Anal 84:102680. https://doi.org/10.1016/j.media.2022.102680

    Article  PubMed  Google Scholar 

Download references

Acknowledgements

This work was partially funded by Ligue Contre le Cancer and France Life Imaging (grant ANR-11-INBS-0006). It was sponsored by the General Directorate for Scientific Research & Technological Development, Ministry of Higher Education & Scientific Research (DGRSDT), Algeria.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Hicham Messaoudi.

Ethics declarations

Conflict of interest

The authors declare that they have no Conflict of interest.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Messaoudi, H., Abbas, M., Badic, B. et al. Automatic future remnant segmentation in liver resection planning. Int J CARS 20, 837–845 (2025). https://doi.org/10.1007/s11548-025-03331-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Version of record:

  • Issue date:

  • DOI: https://doi.org/10.1007/s11548-025-03331-2

Keywords

Profiles

  1. Hicham Messaoudi
  2. Pierre-Henri Conze