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Comment: BioC2026 Schedule Posted; Registration Open for Conference and Post-Conference A by veed0704 • 0

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Comment: Removing peptides with missing values across all samples in limpa greatly influe by epibio ▴ 10

Yes, for sure I will be removing the all-NA peptides. Thanks for the explanation for the lower correlation, it makes total sense. I'll defi…

Comment: Removing peptides with missing values across all samples in limpa greatly influe by Gordon Smyth 53k

Subsetting the data set to the 9 samples for your experiment should be fine, but it would be best to subset out the all NA precursors as we…

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Comment: Removing peptides with missing values across all samples in limpa greatly influe by epibio ▴ 10

Hi, Gordon: First, thanks for the very comprehensive response. - You're totally right, I was subsetting the object after importing with …

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Answer: DiffBind on ATAC seq data

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