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Comment: Proteomics analysis using LIMMA by Gordon Smyth 53k
Proteomics is a lot of different technologies, and it would be helpful if you gave more information about what sort you data you have. Mass…
Answer: Proteomics analysis using LIMMA by Gordon Smyth 53k
See <https://github.com/smythlab/limpa/>.
Comment: PTM analysis in LIMPA by Gordon Smyth 53k
Can you please upgrade to R 4.6.0 and the devel version of limpa, or else just wait for Bioc 3.23 to be released in a few days? The readDIA…
Comment: Empty p-value column in GENESIS output by Stephanie M. Gogarten ▴ 890
The warning message comes from here: https://github.com/UW-GAC/GENESIS/blob/devel/R/admixMap.R#L97 Do you see the message only once, or mu…
Answer: PTM analysis in LIMPA by Diego FGR • 0
Dear Gordon I have two follow up questions: 1. In this case, the complete report.parquet need to be used? or the site_report.parquet? …
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C: Pre-processing of RNA-Seq data for WGCNA and DGE
A: Pre-processing of RNA-Seq data for WGCNA and DGE
Pre-processing of RNA-Seq data for WGCNA and DGE
Answer: Proteomics analysis using LIMMA
Proteomics analysis using LIMMA
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