staphb

StaPH-B

Sponsored OSS

Community Organization

State Public Health Bioinformatics Community

Displaying 1 to 30 of 245 repositories

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An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences

20h

10K+

1

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Freyja: recover relative lineage abundances from mixed SARS-CoV-2 samples from a sequencing dataset

8d

100K+

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Panaroo: An updated pipeline for pangenome investigation

13d

2.1K

1

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Software package for assigning SARS-CoV-2 genome sequences to global lineages

13d

1M+

3

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NCBI Datasets: easily gather data from across NCBI databases

15d

10K+

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BBTools suite of tools from Joint Genome Institute

15d

500K+

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PopPUNK: POPulation Partitioning Using Nucleotide Kmers

20d

5.5K