pyphi
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A toolbox for integrated information theory.
Converts either 2D numpy arrays or DataFrames into DataArrays
hi, I'm investigating a solution when trying to run [test_actual.py](https://github.com/wmayner/pyphi/blob/feature/iit-4.0/test/test_actual.py) ``` (IIT) [diego@diego test]$ python *actual.py but I get the following error: Welcome to PyPhi! If you use PyPhi in...
Hello, We're seeing a test failing on s390x while building pyphi for [NeuroFedora](https://neuro.fedoraproject.org): ``` CPU info: Architecture: s390x CPU op-mode(s): 32-bit, 64-bit Byte Order: Big Endian CPU(s): 3 On-line CPU(s)...
Added keyword arguments to control plot properties, added separate mechanism labels, changed default values
As Max Tegmark pointed out here: https://www.youtube.com/watch?v=QnEtNC8eFso or https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005123 there are many alternative ways of computing phi (he gives 420). For example you can choose how to compute the probability...
When a shortcut is taken, no purview is attached to the MICE object. This can be confusing for users and should be indicated explicitly.
When repeatly run `pyphi.compute.phi(subsystem)`, the CPU using is continue growing and the program speed is contiune slowing down.
This might probably require further prettifying, and I have just started writing tests for the new code, documentation, etc. That said, it's mature enough to ask for review and suggestions....
As Will advised, I changed the code in order to work in the SHORTCIRCUIT_SIA. As a result, it works in the same way as before, but let an user know...
Python 3.12 has landed in Fedora. Rebuilding pyphi with Python 3.12 results in the following test failure: ```python =================================== FAILURES =================================== ___________________________ [doctest] 2014paper.rst ____________________________ 549 550 Figure 12 551...