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Add spatialdata blobs example dataset#2403

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keller-mark merged 7 commits intomainfrom
keller-mark/sdata-blobs-points
Feb 5, 2026
Merged

Add spatialdata blobs example dataset#2403
keller-mark merged 7 commits intomainfrom
keller-mark/sdata-blobs-points

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@keller-mark keller-mark commented Feb 3, 2026

Fixes #

Background

This dataset represents a spatialdata object containing non-tiled points. We want to support this as well, when the number of points is small enough to be below some tiling-required threshold.

Change List

Checklist

  • Have tested PR with one or more demo configurations
  • Documentation added, updated, or not applicable

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github-actions bot commented Feb 3, 2026 •
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Total Size: 7.35 MB

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@keller-mark
Load the feature_index column for non-tiled points, and update spatia…
2af0948 
…l-beta/Spatial.js so that the non-tiled rendering/coloring/filtering matches the tiled case
@keller-mark
Lint-fix
263521a
@keller-mark
Changeset
4cede40
@keller-mark keller-mark marked this pull request as ready for review February 3, 2026 21:22
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github-actions bot commented Feb 3, 2026 •
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Coverage Report

Status Category Percentage Covered / Total
🔵 Lines 13.21% 9169 / 69382
🔵 Statements 13.21% 9169 / 69382
🔵 Functions 48.57% 530 / 1091
🔵 Branches 67.32% 1399 / 2078
File Coverage
File Stmts Branches Functions Lines Uncovered Lines
Changed Files
examples/configs/src/index.js 0% 0% 0% 0% 1-254
examples/configs/src/view-configs/spatial-beta/spatialdata-blobs.js 0% 100% 100% 0% 3-248
packages/file-types/spatial-zarr/src/SpatialDataPointsSource.js 0% 100% 100% 0% 4-247
packages/file-types/spatial-zarr/src/spatialdata-loaders/SpatialDataObsPointsLoader.js 0% 0% 0% 0% 1-238
packages/file-types/zarr/src/AnnDataSource.js 57.62% 76.74% 52.63% 57.62% 18-19, 57-58, 76-78, 85-86, 88-89, 162-165, 201-202, 208, 237-242, 254-255, 268-282, 290-291, 299-316, 324-334, 342-353, 362-386
packages/view-types/spatial-beta/src/Spatial.js 0% 100% 100% 0% 3-2192
Generated in workflow #4812 for commit 7aa895b by the Vitest Coverage Report Action

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keller-mark commented Feb 3, 2026 •
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TODO:

  • load the categorical/string column directly, rather than requiring feature_index? Then, use the feature_name strings and featureSelection directly in the getFillColor functions and rest of the createPointLayer function in Spatial.js?

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keller-mark commented Feb 4, 2026

TODO: update configuration to include the image layer

@keller-mark keller-mark merged commit ea439f8 into main Feb 5, 2026
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@keller-mark keller-mark deleted the keller-mark/sdata-blobs-points branch February 5, 2026 14:53
@github-actions github-actions bot mentioned this pull request Feb 3, 2026
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