Right now all our task templates look something like
job_template: |
#!/bin/bash
#PBS -N {task}
#PBS -l nodes={nodes}:ppn={cores}
#PBS -l walltime={walltime}
#PBS -l mem={mem//10**9}GB
#PBS -o ~/.sos/tasks/{task}.out
#PBS -e ~/.sos/tasks/{task}.err
sos execute {task} -v {verbosity} -s {sig_mode} -m {run_mode}
but this makes it difficult to specify environments for sos execute. For example, if I would like to do
and
I would need to create two tasks queues, or change ~/.sos/hosts between the runs.
Right now all our task templates look something like
but this makes it difficult to specify environments for
sos execute. For example, if I would like to doand
I would need to create two tasks queues, or change
~/.sos/hostsbetween the runs.