Steps to reproduce the issue
Building python@3.11.4 on our Cray system results in a non-functional install using
spack@develop (31fe78e from Wed Sep 20 11:28:52 2023 -0600)- GCC 10.3.0
- Cray SLES 15, x86_64
Spack environment
spack:
view: false
compilers:
- compiler:
spec: gcc@=10.3.0
paths:
cc: /opt/cray/pe/gcc/10.3.0/bin/gcc
cxx: /opt/cray/pe/gcc/10.3.0/bin/g++
f77: /opt/cray/pe/gcc/10.3.0/bin/gfortran
fc: /opt/cray/pe/gcc/10.3.0/bin/gfortran
flags: {}
operating_system: sle_hpc15
target: x86_64
modules: [PrgEnv-gnu-amd]
environment: {}
extra_rpaths: []
concretizer:
reuse: false
unify: false
packages:
all:
require: '%gcc'
target: [zen4]
ncurses:
require: '@6.3 +termlib'
xz:
variants: +pic
specs:
- python
Concretization:
[+] 4teyakj python@3.11.4%gcc@10.3.0+bz2+crypt+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tkinter+uuid+zlib build_system=generic patches=13fa8bf,b0615b2,f2fd060 arch=linux-sle_hpc15-x86_64_v4
[+] zlbxmv3 ^bzip2@1.0.8%gcc@10.3.0~debug~pic+shared build_system=generic arch=linux-sle_hpc15-x86_64_v4
[+] ja6nemy ^diffutils@3.9%gcc@10.3.0 build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] ro4fiho ^expat@2.5.0%gcc@10.3.0+libbsd build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] 7sf6yks ^libbsd@0.11.7%gcc@10.3.0 build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] q27nr33 ^libmd@1.0.4%gcc@10.3.0 build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] xxrw2cv ^gdbm@1.23%gcc@10.3.0 build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] 5d5ahmk ^gettext@0.21.1%gcc@10.3.0+bzip2+curses+git~libunistring+libxml2+tar+xz build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] wx3p4zt ^libiconv@1.17%gcc@10.3.0 build_system=autotools libs=shared,static arch=linux-sle_hpc15-x86_64_v4
[+] vzl2vyq ^libxml2@2.10.3%gcc@10.3.0+pic~python+shared build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] ei2dro4 ^tar@1.34%gcc@10.3.0 build_system=autotools zip=pigz arch=linux-sle_hpc15-x86_64_v4
[+] ka3c2gf ^pigz@2.7%gcc@10.3.0 build_system=makefile arch=linux-sle_hpc15-x86_64_v4
[+] hcp3mzb ^zstd@1.5.5%gcc@10.3.0+programs build_system=makefile compression=none libs=shared,static arch=linux-sle_hpc15-x86_64_v4
[+] ogojdtg ^libffi@3.4.4%gcc@10.3.0 build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] 2to2w5m ^libxcrypt@4.4.35%gcc@10.3.0~obsolete_api build_system=autotools patches=4885da3 arch=linux-sle_hpc15-x86_64_v4
[+] f364rso ^perl@5.38.0%gcc@10.3.0+cpanm+opcode+open+shared+threads build_system=generic patches=714e4d1 arch=linux-sle_hpc15-x86_64_v4
[+] hw3mprt ^berkeley-db@18.1.40%gcc@10.3.0+cxx~docs+stl build_system=autotools patches=26090f4,b231fcc arch=linux-sle_hpc15-x86_64_v4
[+] vs5qwkm ^ncurses@6.3%gcc@10.3.0~symlinks+termlib abi=none build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] 2cltnkk ^openssl@3.1.2%gcc@10.3.0~docs+shared build_system=generic certs=mozilla arch=linux-sle_hpc15-x86_64_v4
[+] avmlirn ^ca-certificates-mozilla@2023-05-30%gcc@10.3.0 build_system=generic arch=linux-sle_hpc15-x86_64_v4
[+] jskx7el ^pkgconf@1.9.5%gcc@10.3.0 build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] 2pm6liu ^readline@8.2%gcc@10.3.0 build_system=autotools patches=bbf97f1 arch=linux-sle_hpc15-x86_64_v4
[+] qrrvjcl ^sqlite@3.42.0%gcc@10.3.0+column_metadata+dynamic_extensions+fts~functions+rtree build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] duzd3zl ^util-linux-uuid@2.38.1%gcc@10.3.0 build_system=autotools arch=linux-sle_hpc15-x86_64_v4
[+] gpdp3ie ^xz@5.4.1%gcc@10.3.0+pic build_system=autotools libs=shared,static arch=linux-sle_hpc15-x86_64_v4
[+] fp2jn4r ^zlib-ng@2.1.3%gcc@10.3.0+compat+opt build_system=autotools patches=299b958,ae9077a,b692621 arch=linux-sle_hpc15-x86_64_v4
$> spack env activate
$> spack install
... OK
$> spack load python
$> which python
/tmp/gnu-debug/spack/opt/spack/linux-sle_hpc15-x86_64_v4/gcc-10.3.0/python-3.11.4-4teyakjavmjou3xbglxeizjivo5z64q3/bin/python
$> python
Could not find platform dependent libraries <exec_prefix>
Python 3.11.4 (main, Sep 20 2023, 11:02:41) [GCC 10.3.0 20210408 (Cray Inc.)] on linux
Type "help", "copyright", "credits" or "license" for more information.
Traceback (most recent call last):
File "/etc/pythonstart", line 7, in <module>
import readline
ModuleNotFoundError: No module named 'readline'
>>>
If I manually set PYTHONPATH I can get rid of the No module named 'readline' error:
$> export PYTHONPATH=$(spack location -i python)/lib64/python3.11/lib-dynload:$PYTHONPATH
$> python
Could not find platform dependent libraries <exec_prefix>
Python 3.11.4 (main, Sep 20 2023, 11:02:41) [GCC 10.3.0 20210408 (Cray Inc.)] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>>
Error message
Error message
... see above
Information on your system
- Spack: 0.21.0.dev0 (31fe78e)
- Python: 3.6.15
- Platform: linux-sle_hpc15-x86_64_v4
- Concretizer: clingo
Additional information
spack-build-env.txt
spack-build-out.txt
General information
Steps to reproduce the issue
Building
python@3.11.4on our Cray system results in a non-functional install usingspack@develop(31fe78e fromWed Sep 20 11:28:52 2023 -0600)Spack environment
spack: view: false compilers: - compiler: spec: gcc@=10.3.0 paths: cc: /opt/cray/pe/gcc/10.3.0/bin/gcc cxx: /opt/cray/pe/gcc/10.3.0/bin/g++ f77: /opt/cray/pe/gcc/10.3.0/bin/gfortran fc: /opt/cray/pe/gcc/10.3.0/bin/gfortran flags: {} operating_system: sle_hpc15 target: x86_64 modules: [PrgEnv-gnu-amd] environment: {} extra_rpaths: [] concretizer: reuse: false unify: false packages: all: require: '%gcc' target: [zen4] ncurses: require: '@6.3 +termlib' xz: variants: +pic specs: - pythonConcretization:
If I manually set
PYTHONPATHI can get rid of theNo module named 'readline'error:Error message
Error message
Information on your system
Additional information
spack-build-env.txt
spack-build-out.txt
General information
spack debug reportand reported the version of Spack/Python/Platformspack maintainers <name-of-the-package>and @mentioned any maintainers