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  1. pga_workflow pga_workflow Public

    Pangenome Guided Genome Assembly Workflow

    Python 1

  2. vg_anchors vg_anchors Public

    A python tool to construct anchors from a pangenome using read alignments

    Python

  3. variant_annotation_wf variant_annotation_wf Public

    Forked from jmonlong/variant_annotation_wf

    Workflow to annotate SNVs, indels, and structural variants

    Python

  4. SegMeth SegMeth Public

    Segmentation by Methylation using circular binary segmentation

    Python 2

  5. denovo_smallvars denovo_smallvars Public

    This WDL workflow wraps rtgtools vcfeval and validation scripts to generate annotated denovo candidates in a trio

    WDL 1