Search results

Resolvi.load overflows memory

bug

Status: Open.

#3674 In scverse/scvi-tools;

· jairaj-mathur opened on Jan 15, 2026

Resolvi differential expression takes long time to run

bug

Status: Open.

#3672 In scverse/scvi-tools;

· jairaj-mathur opened on Jan 14, 2026

Incorrect autotune checkpoint frequency

bug

Status: Open.

#3669 In scverse/scvi-tools;

· FrenkT opened on Jan 9, 2026

Allow custom label_key for scib-metrics in scvi.autotune

enhancement

Status: Open.

#3647 In scverse/scvi-tools;

· catheriz opened on Dec 14, 2025

Fail to create reproducible model

bug

Status: Open.

#3611 In scverse/scvi-tools;

· JoseSanchezVillicana opened on Nov 19, 2025

Use scverse template

refactor

Status: Open.

Task

#3600 In scverse/scvi-tools;

· Zethson opened on Nov 14, 2025

Clarify usage of get_normalized_expression(transform_batch= ...) in “Atlas-level integration of lung data” tutorial

Status: Open.

#3578 In scverse/scvi-tools;

· Siyutex opened on Oct 29, 2025

Error when trying to feature native MLX accelerated scvi

enhancement

Status: Open.

#3268 In scverse/scvi-tools;

· c0nleyinnnn opened on Mar 23, 2025

MrVI slowdown due to JAX compilation update

backlog

bug

Status: Open.

#3179 In scverse/scvi-tools;

· justjhong opened on Feb 10, 2025

Use explicit configs instead of kwargs

enhancement

Status: Open.

#2904 In scverse/scvi-tools;

· martinkim0 opened on Jul 18, 2024

·  

scvi-tools 2.0

Jax version of VAEMixin

backlog

enhancement

good first issue

jax

Status: Open.

#2779 In scverse/scvi-tools;

· justjhong opened on May 6, 2024

Training models with torch.Tensor input

enhancement

P1

Status: Open.

#2736 In scverse/scvi-tools;

· j-bac opened on Apr 22, 2024

·  

scvi-tools 1.2