feat(rs,py,r): add get_node_depth and get_node_depths functions#171
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Neclow merged 4 commits intosbhattlab:mainfrom Jan 16, 2026
Merged
feat(rs,py,r): add get_node_depth and get_node_depths functions#171Neclow merged 4 commits intosbhattlab:mainfrom
Neclow merged 4 commits intosbhattlab:mainfrom
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Add functions to compute node depth (distance from root) following the BEAST/ETE convention where root has depth 0 and depths increase toward leaves. - get_node_depth: returns depth of a single node - get_node_depths: returns depths of all nodes as a vector For vectors, topological depth is used (all branch lengths = 1). For matrices, actual branch lengths are used. Includes tests comparing with ape's node.depth.edgelength in R. Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
…into feat/node_depth
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Add functions to compute node depth (distance from root) following the BEAST/ETE convention where root has depth 0 and depths increase toward leaves.
For vectors, topological depth is used (all branch lengths = 1). For matrices, actual branch lengths are used.
Includes tests comparing with ape's node.depth.edgelength in R.
(My first experience with @claude)