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Limit sort memory in "samtools split" test#2312

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whitwham merged 1 commit into
samtools:developfrom
daviesrob:sort-mem-limit
Feb 24, 2026
Merged

Limit sort memory in "samtools split" test#2312
whitwham merged 1 commit into
samtools:developfrom
daviesrob:sort-mem-limit

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@daviesrob

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The default sort buffer size is much bigger than necessary for the tests, and can lead to spurious failures on constrained test environments. Add the same option used elsewhere to ensure sort processes don't run out of memory.

The default sort buffer size is much bigger than necessary for
the tests, and can lead to spurious failures on constrained test
environments.  Add the same option used elsewhere to ensure
sort processes don't run out of memory.
@whitwham whitwham self-assigned this Feb 24, 2026
@whitwham whitwham merged commit 3921f9f into samtools:develop Feb 24, 2026
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@daviesrob daviesrob deleted the sort-mem-limit branch February 24, 2026 15:52
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