Allow splitting by integer tag value#2005
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Also fix bug where the -d option would reset the format set by -f if it came later on the command line.
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Could you add the new option to the usage? |
This may be of use if, for some reason, the output file names need to be ordered.
* Tag value * Different output file types * Zero padding for %# * Verbatim percent sign * Invalid formats
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Done - the new option is now included in the usage message. |
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samtools split-doption so that it works on integer tags as well as strings.-d TAGoption would override a-f FORMATthat came before it on the command line.-poption to allow numeric values to be zero-padded.samtools splitformat string and functional tests.