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samtools stats reference information #2139

Description

@fgvieira

Would it be possible to have some stats on the references (target sequences) also?
I think it would be nice to have, at least, the number/list of target sequences (from the header of the BAM file)

Optional, if the ref file is also provided, one could also have other metrics (e.g.):

  • GC (or avg)
  • length (or sum/min/max/avg)
  • number of undetermined bases

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