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Description
I am trying to run this template:
ID Measurement definition
ID EC EFO:0001444 and (RO:0002314 some %)
EFO:0004515 UBERON:0001015
using a query that does not involve an external ontology:
robot template --template template.tsv --prefix "EFO: http://www.ebi.ac.uk/efo/EFO_" --prefix "RO: http://purl.obolibrary.org/obo/RO_" --prefix "UBERON: http://purl.obolibrary.org/obo/UBERON_" -o out.owl
But sed keeps failing on the expression EC EFO:0001444 and (RO:0002314 some %). (EC EFO:0001444 and % works file):
MANCHESTER PARSE ERROR the expression 'EFO:0001444 and (RO:0002314 some UBERON:0001015)' at row 3, column 3 in table "../templates/definemeasurements.tsv" cannot be parsed: encountered unknown 'some'
For details see: http://robot.obolibrary.org/template#manchester-parse-error
Use the -vvv option to show the stack trace.
Use the --help option to see usage information.
So basically, I would like to know how, or if, I can generate a template with a role if I don't have some input ontology to draw the labels from (i.e. to write an expression like: EFO:0001444 and ('inheres_in' some UBERON:0001015).
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