test failures for setuptools >= 60.0 #20692
Description
Describe the issue:
numpy test suite is failing with error message distutils Version classes are deprecated. Use packaging.version instead.
Reproduce the code example:
I'm using the typical PEP517 based build, install and test cycle used on building packages from non-root account.
- `python3 -sBm build -w`
- run `runtests.py`Error message:
+ cd numpy-1.22.0
+ /usr/bin/python3 runtests.py
Building, see build.log...
... build in progress
... build in progress
Build OK
NumPy version 1.22.0
NumPy relaxed strides checking option: True
NumPy CPU features: SSE SSE2 SSE3 SSSE3* SSE41* POPCNT* SSE42* AVX* F16C* FMA3* AVX2* AVX512F? AVX512CD? AVX512_KNL? AVX512_KNM? AVX512_SKX? AVX512_CLX? AVX512_CNL? AVX512_ICL?
================================================================================== ERRORS ==================================================================================
_______________________________________ ERROR collecting build/testenv/lib64/python3.8/site-packages/numpy/core/tests/test_cython.py _______________________________________
numpy/core/tests/test_cython.py:22: in <module>
required_version = LooseVersion("0.29.21")
LooseVersion = <class 'distutils.version.LooseVersion'>
__builtins__ = <builtins>
__cached__ = '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/core/tests/__pycache__/test_cython.cpython-38.pyc'
__doc__ = None
__file__ = '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/core/tests/test_cython.py'
__loader__ = <_pytest.assertion.rewrite.AssertionRewritingHook object at 0x7fb259630730>
__name__ = 'numpy.core.tests.test_cython'
__package__ = 'numpy.core.tests'
__spec__ = ModuleSpec(name='numpy.core.tests.test_cython', loader=<_pytest.assertion.rewrite.AssertionRewritingHook object at 0x7...home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/core/tests/test_cython.py')
__warningregistry__ = {'version': 341}
cython = <module 'cython' from '/usr/lib64/python3.8/site-packages/cython.py'>
cython_version = '0.29.26'
np = <module 'numpy' from '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/__init__.py'>
os = <module 'os' from '/usr/lib64/python3.8/os.py'>
pytest = <module 'pytest' from '/usr/lib/python3.8/site-packages/pytest/__init__.py'>
shutil = <module 'shutil' from '/usr/lib64/python3.8/shutil.py'>
subprocess = <module 'subprocess' from '/usr/lib64/python3.8/subprocess.py'>
sys = <module 'sys' (built-in)>
/usr/lib/python3.8/site-packages/setuptools/_distutils/version.py:53: in __init__
warnings.warn(
E DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
self = <[AttributeError("'LooseVersion' object has no attribute 'vstring'") raised in repr()] LooseVersion object at 0x7fb258d68d00>
vstring = '0.29.21'
____________________________________ ERROR collecting build/testenv/lib64/python3.8/site-packages/numpy/random/tests/test_extending.py _____________________________________
numpy/random/tests/test_extending.py:39: in <module>
required_version = LooseVersion('0.29.21')
LooseVersion = <class 'distutils.version.LooseVersion'>
__builtins__ = <builtins>
__cached__ = '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/random/tests/__pycache__/test_extending.cpython-38.pyc'
__doc__ = None
__file__ = '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/random/tests/test_extending.py'
__loader__ = <_pytest.assertion.rewrite.AssertionRewritingHook object at 0x7fb259630730>
__name__ = 'numpy.random.tests.test_extending'
__package__ = 'numpy.random.tests'
__spec__ = ModuleSpec(name='numpy.random.tests.test_extending', loader=<_pytest.assertion.rewrite.AssertionRewritingHook object a...tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/random/tests/test_extending.py')
__warningregistry__ = {'version': 359}
cffi = None
cython = <module 'cython' from '/usr/lib64/python3.8/site-packages/cython.py'>
cython_version = '0.29.26'
exec_mod_from_location = <function exec_mod_from_location at 0x7fb259a4f1f0>
np = <module 'numpy' from '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/__init__.py'>
numba = None
os = <module 'os' from '/usr/lib64/python3.8/os.py'>
pytest = <module 'pytest' from '/usr/lib/python3.8/site-packages/pytest/__init__.py'>
shutil = <module 'shutil' from '/usr/lib64/python3.8/shutil.py'>
subprocess = <module 'subprocess' from '/usr/lib64/python3.8/subprocess.py'>
sys = <module 'sys' (built-in)>
w = []
warnings = <module 'warnings' from '/usr/lib64/python3.8/warnings.py'>
/usr/lib/python3.8/site-packages/setuptools/_distutils/version.py:53: in __init__
warnings.warn(
E DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
self = <[AttributeError("'LooseVersion' object has no attribute 'vstring'") raised in repr()] LooseVersion object at 0x7fb2530617c0>
vstring = '0.29.21'
========================================================================= short test summary info ==========================================================================
ERROR numpy/core/tests/test_cython.py - DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
ERROR numpy/random/tests/test_extending.py - DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Interrupted: 2 errors during collection !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
1292 deselected, 2 errors in 15.44sNumPy/Python version information:
numpy 1.22.0
python 3.8.12
BTW is it any reason why numpy is not using pytest straight?
Here is pytest output
+ PYTHONPATH=/home/tkloczko/rpmbuild/BUILDROOT/python-numpy-1.22.0-2.fc35.x86_64/usr/lib64/python3.8/site-packages:/home/tkloczko/rpmbuild/BUILDROOT/python-numpy-1.22.0-2.fc35.x86_64/usr/lib/python3.8/site-packages
+ /usr/bin/pytest -ra --import-mode=importlib
=========================================================================== test session starts ============================================================================
platform linux -- Python 3.8.12, pytest-6.2.5, py-1.11.0, pluggy-1.0.0
benchmark: 3.4.1 (defaults: timer=time.perf_counter disable_gc=False min_rounds=5 min_time=0.000005 max_time=1.0 calibration_precision=10 warmup=False warmup_iterations=100000)
rootdir: /home/tkloczko/rpmbuild/BUILD/numpy-1.22.0, configfile: pytest.ini
plugins: benchmark-3.4.1, hypothesis-6.34.1
collected 0 items / 1 error
================================================================================== ERRORS ==================================================================================
______________________________________________________________________ ERROR collecting test session _______________________________________________________________________
/usr/lib/python3.8/site-packages/pluggy/_manager.py:115: in register
hook._maybe_apply_history(hookimpl)
hook = <_HookCaller 'pytest_addoption'>
hookcallers = []
hookimpl = <HookImpl plugin_name='/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/co...test' from '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/conftest.py'>>
hookimpl_opts = {'hookwrapper': False, 'optionalhook': False, 'specname': None, 'tryfirst': False, ...}
method = <function pytest_addoption at 0x7fb89d720c10>
name = 'pytest_addoption'
plugin = <module 'conftest' from '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/conftest.py'>
plugin_name = '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/conftest.py'
self = <_pytest.config.PytestPluginManager object at 0x7fb9039e50d0>
/usr/lib/python3.8/site-packages/pluggy/_hooks.py:300: in _maybe_apply_history
res = self._hookexec(self.name, [method], kwargs, False)
kwargs = {'parser': <_pytest.config.argparsing.Parser object at 0x7fb902e87460>, 'pluginmanager': <_pytest.config.PytestPluginManager object at 0x7fb9039e50d0>}
method = <HookImpl plugin_name='/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/co...test' from '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/conftest.py'>>
result_callback = None
self = <_HookCaller 'pytest_addoption'>
/usr/lib/python3.8/site-packages/pluggy/_manager.py:80: in _hookexec
return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
firstresult = False
hook_name = 'pytest_addoption'
kwargs = {'parser': <_pytest.config.argparsing.Parser object at 0x7fb902e87460>, 'pluginmanager': <_pytest.config.PytestPluginManager object at 0x7fb9039e50d0>}
methods = [<HookImpl plugin_name='/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/c...est' from '/home/tkloczko/rpmbuild/BUILD/numpy-1.22.0/build/testenv/lib64/python3.8/site-packages/numpy/conftest.py'>>]
self = <_pytest.config.PytestPluginManager object at 0x7fb9039e50d0>
build/testenv/lib64/python3.8/site-packages/numpy/conftest.py:56: in pytest_addoption
parser.addoption("--available-memory", action="store", default=None,
parser = <_pytest.config.argparsing.Parser object at 0x7fb902e87460>
/usr/lib/python3.8/site-packages/_pytest/config/argparsing.py:96: in addoption
self._anonymous.addoption(*opts, **attrs)
attrs = {'action': 'store', 'default': None, 'help': 'Set amount of memory available for running the test suite. This can resu...memory to be skipped. Equivalent to setting environment variable NPY_AVAILABLE_MEM. Default: determinedautomatically.'}
opts = ('--available-memory',)
self = <_pytest.config.argparsing.Parser object at 0x7fb902e87460>
/usr/lib/python3.8/site-packages/_pytest/config/argparsing.py:355: in addoption
raise ValueError("option names %s already added" % conflict)
E ValueError: option names {'--available-memory'} already added
attrs = {'action': 'store', 'default': None, 'help': 'Set amount of memory available for running the test suite. This can resu...memory to be skipped. Equivalent to setting environment variable NPY_AVAILABLE_MEM. Default: determinedautomatically.'}
conflict = {'--available-memory'}
optnames = ('--available-memory',)
self = <_pytest.config.argparsing.OptionGroup object at 0x7fb902e87490>
========================================================================= short test summary info ==========================================================================
ERROR - ValueError: option names {'--available-memory'} already added
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
============================================================================= 1 error in 1.32s =============================================================================