Add listDirectory() to Path type and deprecate listFiles()#6581
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bentsherman merged 2 commits intomasterfrom Dec 1, 2025
Merged
Add listDirectory() to Path type and deprecate listFiles()#6581bentsherman merged 2 commits intomasterfrom
listDirectory() to Path type and deprecate listFiles()#6581bentsherman merged 2 commits intomasterfrom
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christopher-hakkaart
approved these changes
Nov 20, 2025
Signed-off-by: Ben Sherman <bentshermann@gmail.com>
listFiles() from Path[] to List<Path>listDirectory() to Path type and deprecate listFiles()
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Fix #6152
The
listFiles()method is problematic because the implementation returns aPath[]instead of aCollection<Path>. The array type supports most of the same functionality, but not all, leading to weird bugs such as not being able to supply as a process path input.Additionally, TaskPath does not implement
listFiles()correctly, which leads to strange errors when callinglistFiles()on a task input in the task body.Introduce
listDirectory()as a replacement forlistFiles()that doesn't have the above issuesDeprecate
listFiles()in the Nextflow language (doesn't need to be deprecated in the runtime)Clean up documentation of Path type