Merged
Conversation
Signed-off-by: jorgee <jorge.ejarque@seqera.io>
✅ Deploy Preview for nextflow-docs-staging canceled.
|
Signed-off-by: jorgee <jorge.ejarque@seqera.io>
pditommaso
approved these changes
Oct 22, 2025
|
Hello! Can I ask a question on this? I currently have an AWS job definition defined in terraform containing secrets. I want to replace this job definition with one created by Nextflow via configuration settings. I have successfully managed to find most of what I need in the aws configuration documentation however I cannot seem to workout how to tell Nextflow which secret to use. I imagine having to provide a "name" and "valueFrom" (the latter being an ARN). I am launching this from Seqera Platform and have configured the launchpad with the correct workspace secrets. Any guidance would be super helpful! Thanks, |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
This PR include the secrets to the ContainerProperties builder used for AWS Batch jobs. They were missed during the AWS SDK v2 refactor.