This pull request updates the Groovy library dependencies across multiple modules to version 4.0.28. The changes ensure consistency and compatibility with the latest Groovy release.

Dependency Updates

• Updated Groovy dependencies from version 4.0.27 to 4.0.28 in modules/nextflow/build.gradle, including groovy, groovy-nio, groovy-xml, groovy-json, groovy-templates, and groovy-yaml. This also includes the groovy-test dependency for test fixtures. [1] [2]
• Updated Groovy dependencies in modules/nf-commons/build.gradle to version 4.0.28, including groovy, groovy-nio, and groovy-json. [1] [2]
• Updated Groovy dependencies in modules/nf-httpfs/build.gradle to version 4.0.28, including groovy, groovy-nio, and groovy-json.
• Updated groovy dependency to version 4.0.28 in modules/nf-lang/build.gradle.

Plugin-Specific Updates

• Updated Groovy test dependencies to version 4.0.28 in the following plugin modules:
  • nf-amazon
  • nf-azure
  • nf-cloudcache
  • nf-codecommit
  • nf-console (including groovy-swing)
  • nf-google
  • nf-k8s
  • nf-tower (including groovy-json)
  • nf-wave