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@neuropoly

NeuroPoly

Ecole Polytechnique, Université de Montréal

Popular repositories Loading

  1. totalspineseg totalspineseg Public

    Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterative Algorithm.

    Python 89 8

  2. gmseg gmseg Public

    Spinal cord gray matter segmentation using deep dilated convolutions.

    Jupyter Notebook 45 8

  3. domainadaptation domainadaptation Public

    Repository for the article "Unsupervised domain adaptation for medical imaging segmentation with self-ensembling".

    Python 44 8

  4. deep-active-learning deep-active-learning Public

    Implementation of active learning features for AxonDeepSeg software (axon-myelin segmentation)

    Jupyter Notebook 38 13

  5. gifmaker gifmaker Public

    Convert images to GIF animation.

    Python 20 3

  6. axonseg axonseg Public

    Segment axon and myelin from microscopy data. Written in Matlab.

    MATLAB 19 12

Repositories

Showing 10 of 69 repositories
  • awesome-spine-mri Public

    Awesome list about open-source spine MRI dataset.

    neuropoly/awesome-spine-mri’s past year of commit activity
    1 CC0-1.0 0 2 0 Updated Mar 30, 2026
  • neuro.polymtl.ca Public

    NeuroPoly's Website

    neuropoly/neuro.polymtl.ca’s past year of commit activity
    Python 3 10 26 3 Updated Mar 27, 2026
  • totalspineseg Public

    Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterative Algorithm.

    neuropoly/totalspineseg’s past year of commit activity
    Python 89 LGPL-3.0 8 17 3 Updated Mar 27, 2026
  • neuropoly-db Public
    neuropoly/neuropoly-db’s past year of commit activity
    Python 0 1 1 0 Updated Mar 26, 2026
  • intranet.neuro.polymtl.ca Public

    NeuroPoly's lab manual

    neuropoly/intranet.neuro.polymtl.ca’s past year of commit activity
    HTML 7 8 45 3 Updated Mar 23, 2026
  • BrainGrowthPrediction Public

    Pipeline to predict pediatric 3D MRI scans in a longitudinal fashion

    neuropoly/BrainGrowthPrediction’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 11, 2026
  • modular_optuna_ml Public

    Modular framework for automating large-scale permutations of Optuna ML studies

    neuropoly/modular_optuna_ml’s past year of commit activity
    Python 3 0 17 (1 issue needs help) 4 Updated Mar 8, 2026
  • axonpacking Public
    neuropoly/axonpacking’s past year of commit activity
    MATLAB 8 MIT 5 1 0 Updated Feb 26, 2026
  • AugLab Public

    This repository investigates the influence of different data augmentation strategies on MRI training performance.

    neuropoly/AugLab’s past year of commit activity
    Python 5 GPL-3.0 0 9 0 Updated Feb 4, 2026
  • data-management Public

    Repo that deals with datalad aspects for internal use

    neuropoly/data-management’s past year of commit activity
    Python 4 0 141 (2 issues need help) 2 Updated Jan 14, 2026