Skip to content

Improve reading of Simple Neurite Tracer fills#448

Merged
jefferis merged 6 commits intomasterfrom
feature/snt-fill
Nov 10, 2020
Merged

Improve reading of Simple Neurite Tracer fills#448
jefferis merged 6 commits intomasterfrom
feature/snt-fill

Conversation

@jefferis
Copy link
Copy Markdown
Collaborator

@jefferis jefferis commented Nov 9, 2020

While this provides basic support for reading fills, it is only at the level of 3D coordinates for each positive voxel.

* prep work for reading fill info as well as skeleton
* confirmed equal for some sample data
* this is a change, but otherwise they depend on XML and are less accessible
* they were so far unused by nat
* can't really do anything in read.neuron with the fill though ...
* was previously reading fill (which can be very slow) even though I doubt anyone was using it.
@coveralls
Copy link
Copy Markdown

Coverage Status

Coverage decreased (-0.09%) to 81.229% when pulling cb2c144 on feature/snt-fill into e9d8b49 on master.

@jefferis jefferis merged commit b40a6bf into master Nov 10, 2020
@jefferis jefferis deleted the feature/snt-fill branch January 8, 2021 09:04
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants