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Zombie MCP server processes spin at ~95% CPU after session close (v1.0.103) — likely the unresolved SDK stdin end-handler issue noted in #311 #388

@meikocho1

Description

@meikocho1

Summary

On context-mode v1.0.103 (current latest), MCP server processes orphaned by closed Claude Code sessions remain alive in R (running) state and pin a CPU core each (~87–96% CPU) until manually kill -9'd. This appears to be the same root cause referenced in the resolution comment of #311:

The remaining root cause (vendored MCP SDK missing stdin end handler causing the CPU spin) is tracked separately and requires coordination with the SDK constraints from #236.

#311 is closed but this underlying CPU spin behavior is still occurring in v1.0.103.

Environment

  • context-mode: 1.0.103 (npx-launched)
  • Claude Code: 2.1.123
  • Node: v20.18.1
  • npm: 10.8.2
  • OS: macOS 15.7.4 (arm64)
  • Launch path: ~/.npm/_npx/<hash>/node_modules/.bin/context-mode

Symptoms

Six orphaned context-mode processes were found, oldest had been running 8 days since the originating Claude Code session was closed:

PID %CPU Started Cumulative CPU time
86511 91.0 Apr 23 4787 min (~80 h)
11364 90.4 Fri 4693 min
58997 91.3 Mon 2714 min
10044 87.3 Tue 1993 min
52281 96.2 Tue 1648 min
46306 90.6 Today 68 min

All processes were in R state (busy-looping, not sleeping). Each had a corresponding npm exec context-mode parent that was also orphaned.

Reproduction

Not deterministic, but observed across multiple closed Claude Code sessions over ~10 days. The processes accumulate one per closed session.

Behavior on shutdown

  • pkill -TERM -f context-modeno effect, processes keep spinning
  • pkill -KILL -f context-mode → required to stop them

This matches the hypothesis that the busy loop is happening in a tight read loop on stdin without an end handler — a stuck SIGTERM handler or absence of one would explain why only SIGKILL works.

Relation to prior fixes

Suggested next step

Patch the vendored MCP SDK to register a stdin end/close listener that triggers process.exit(0) (with a short grace period to avoid the false-positive issue described in #236). Alternatively, a periodic ppid poll that also checks if stdin is still readable would catch this case.

Happy to provide more diagnostics (e.g., sample output showing the busy loop) on request.

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