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CI: Azure_Tests Win timeout occasionally

Status: Open.

#5191 In mdanalysis/mdanalysis;

· PardhavMaradani opened on Dec 29, 2025

Support per-frame analysis by AnalysisBase-based classes for streamed trajectories

Component-Analysis

enhancement

streaming

Status: Open.

Feature

#5183 In mdanalysis/mdanalysis;

· PardhavMaradani opened on Dec 22, 2025

Add option for <code>gemmi</code> backend for PDB reading

Component-Readers

Format-PDB

Status: Open.

#5141 In mdanalysis/mdanalysis;

· marinegor opened on Nov 6, 2025

Incorrect unwrapping for LAMMPS trajectories due to unused image flags for periodic boundary condition

format-LAMMPS

PBC

Status: Open.

#5138 In mdanalysis/mdanalysis;

· gitsirsha opened on Oct 28, 2025

Several contributions from v2.10.0 are missing from either changelog or authors

Status: Open.

#5136 In mdanalysis/mdanalysis;

· IAlibay opened on Oct 25, 2025

missing test for LAMMPS DumpReader for ValueError when missing coordinates

format-LAMMPS

help wanted

testing

Status: Open.

#5127 In mdanalysis/mdanalysis;

· orbeckst opened on Oct 14, 2025

Disable build isolation in pip only cron tests after next release

Status: Open.

#5125 In mdanalysis/mdanalysis;

· IAlibay opened on Oct 12, 2025

Convert units of trajectory data when constructing a universe

format-LAMMPS

units

Status: Open.

#5115 In mdanalysis/mdanalysis;

· jkalayan opened on Sep 24, 2025

Use native scipy periodic KDTree for orthorhombic boxes?

help wanted

PBC

performance

Status: Open.

#5114 In mdanalysis/mdanalysis;

· orbeckst opened on Sep 14, 2025

guess_TopologyAttrs guesses incorrect bonds for DMS lipids in MDAnalysis &gt; 2.7.0

Component-Topology

defect

Status: Open.

#5102 In mdanalysis/mdanalysis;

· ricard1997 opened on Aug 27, 2025

Inncorrect use of simple method when random frames are selected in run()

Component-Analysis

defect

Status: Open.

#5100 In mdanalysis/mdanalysis;

· gitsirsha opened on Aug 18, 2025

Cite: Add citation to <code>IMDReader</code> once IMDv3 paper is published

Status: Open.

#5094 In mdanalysis/mdanalysis;

· amruthesht opened on Aug 4, 2025