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PE reads filtering strategy

Status: Open.

#395 In liulab-dfci/TRUST4;

· yuyuleung opened on Jan 30, 2026

Different usage of -f and -ref parameters

Status: Open.

#389 In liulab-dfci/TRUST4;

· yuyuleung opened on Dec 9, 2025

Filtering of single cell TRUST4 output

Status: Open.

#386 In liulab-dfci/TRUST4;

· leewqa opened on Nov 17, 2025

Bulk vs. Single Cell difference

Status: Open.

#381 In liulab-dfci/TRUST4;

· meaksu opened on Oct 16, 2025

T cell data but there are many BCR

Status: Open.

#380 In liulab-dfci/TRUST4;

· Mashuaiii opened on Oct 13, 2025

Segmentation Fault long ONT reads

Status: Open.

#376 In liulab-dfci/TRUST4;

· AWalker-ctu opened on Sep 19, 2025

TRUST4 with Parse Biosciences WT

Status: Open.

#371 In liulab-dfci/TRUST4;

· obrien-james opened on Jul 5, 2025

can TRUST4 use more cores at the following step

Status: Open.

#370 In liulab-dfci/TRUST4;

· Tom8huang opened on Jul 2, 2025

Does TRUST4 have GPU support?

Status: Open.

#365 In liulab-dfci/TRUST4;

· fengtong2018 opened on May 30, 2025

Run Trust4 on BD Rhapsody platform

Status: Open.

#363 In liulab-dfci/TRUST4;

· fonseca-dfm opened on May 28, 2025

May sequence alignment need to be optimized?

Status: Open.

#340 In liulab-dfci/TRUST4;

· ruffyp opened on Jan 3, 2025

Question about run-trust4

Status: Open.

#338 In liulab-dfci/TRUST4;

· CoooooolM opened on Dec 23, 2024