Skip to content

Explain seqtk comp columns #47

@slowkow

Description

@slowkow

The usage says:

seqtk comp
Usage:  seqtk comp [-u] [-r in.bed] <in.fa>

Output format: chr, length, #A, #C, #G, #T, #2, #3, #4, #CpG, #tv, #ts, #CpG-ts

Can you please explain the meaning of #2 #3 #4 #CpG #tv #ts #CpG-ts? I read your code, but it is hard to digest for me.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions