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  1. team113sanger/map-to-genome team113sanger/map-to-genome Public

    A pipeline to further explore SPARKI's hits

    Nextflow

  2. team113sanger/sparki team113sanger/sparki Public

    SPARKI (Statistical Process Aimed at Robust Kraken2 Interpretation), a framework developed in R to help collate, refine, visualise & interpret Kraken2 outputs.

    R 3

  3. team113sanger/sparki-nf team113sanger/sparki-nf Public

    an end-to-end pathogen identification pipeline

    Nextflow