Search results

Large-scale data selection: select multiple samples (bulk data) for comparing the results from different branches.

Status: Open.

#544 In goekelab/bambu;

· SuiYue-2308 opened on Mar 6, 2026

BiocParallel errors when running bambu

Status: Open.

#541 In goekelab/bambu;

· lyj95618 opened on Feb 12, 2026

which version of xgboost is ok?

Status: Open.

#539 In goekelab/bambu;

· lingfengxu opened on Feb 9, 2026

High NDR values when quantifying transposable elements in exosomes

Status: Open.

#536 In goekelab/bambu;

· NaixiangYu opened on Jan 29, 2026

error when using bambu to quantify SIRV

Status: Open.

#532 In goekelab/bambu;

· yinshiyi opened on Jan 20, 2026

unittest to be updated for devel_pre_v4

bambu-devFeature is implemented in development branchFeature is implemented in development branch

bugSomething isn't workingSomething isn't working

enhancementNew feature or requestNew feature or request

Status: Open.

#530 In goekelab/bambu;

· cying111 opened on Jan 15, 2026

Dependency issues when installing

Status: Open.

#523 In goekelab/bambu;

· sophiachen1 opened on Jan 11, 2026

Error while running bambu on single-cell long-read RNA-seq data

Status: Open.

#514 In goekelab/bambu;

· MapleLin-Bio opened on Dec 23, 2025

Error while running bambu on multiple samples

Status: Open.

#513 In goekelab/bambu;

· Motoufiq opened on Dec 4, 2025

Bambu stuck downloading

Status: Open.

#507 In goekelab/bambu;

· Coracollar opened on Oct 3, 2025

questions about default NDR values if running in de novo mode

Status: Open.

#504 In goekelab/bambu;

· alexyfyf opened on Sep 9, 2025

Possibility to extend known gene models by adding UTRs

Status: Open.

#500 In goekelab/bambu;

· Annie-GW opened on Jun 26, 2025