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update configuration files and scripts to release 8.0#140

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ludwiglierhammer merged 161 commits into
glamod:mainfrom
ludwiglierhammer:release_8
Oct 20, 2025
Merged

update configuration files and scripts to release 8.0#140
ludwiglierhammer merged 161 commits into
glamod:mainfrom
ludwiglierhammer:release_8

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@ludwiglierhammer

@ludwiglierhammer ludwiglierhammer commented Jun 23, 2025 •
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codecov-commenter commented Jun 23, 2025 •
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Codecov Report

❌ Patch coverage is 24.57627% with 89 lines in your changes missing coverage. Please review.
✅ Project coverage is 16.04%. Comparing base (eaee98d) to head (e1061d1).

Files with missing lines Patch % Lines
..._processing/obs_suite/lotus_scripts/level_slurm.py 0.00% 63 Missing ⚠️
...rine_processing/post_processing/post_processing.py 15.00% 17 Missing ⚠️
..._marine_processing/obs_suite/modules/_utilities.py 82.60% 4 Missing ⚠️
glamod_marine_processing/cli.py 0.00% 2 Missing ⚠️
glamod_marine_processing/cli_obs.py 0.00% 2 Missing ⚠️
glamod_marine_processing/utilities.py 0.00% 1 Missing ⚠️
Additional details and impacted files 
@@            Coverage Diff             @@
##             main     #140      +/-   ##
==========================================
+ Coverage   15.93%   16.04%   +0.11%     
==========================================
  Files          15       16       +1     
  Lines         797      860      +63     
==========================================
+ Hits          127      138      +11     
- Misses        670      722      +52
Flag Coverage Δ
unittests 16.04% <24.57%> (+0.11%) ⬆️

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ludwiglierhammer and others added 17 commits June 30, 2025 15:08
@ludwiglierhammer
opitonally, run jobs or tasks per job interactivelly
6bfe81b
@ludwiglierhammer
run jobs in parallel
3ce33a9
@ludwiglierhammer
create one large taskfarm file if parallel_jobs is True
a16869e
@ludwiglierhammer
silence GNU parallel citation notice
b9c433b
@ludwiglierhammer
allow multiple source pattern
ae6df33
@ludwiglierhammer
Merge branch 'release_8' of https://github.com/ludwiglierhammer/glamo…
eaa1849 
…d-marine-processing into release_8
@ludwiglierhammer
allow multiple source pattern
646d3ae
@ludwiglierhammer
fixing post processing for r8
db7ff05
@ludwiglierhammer
optionally, run post-processing in parallel
74afd50
@ludwiglierhammer
optionally, use nohup to run job scripts in the background
ee26f6a
@ludwiglierhammer
Merge branch 'main' into release_8
9047f39
@ludwiglierhammer
update post_processing
6ea0e8b
@ludwiglierhammer
comment wind QC
c479f32
@ludwiglierhammer
make parallel computing with nohup working
ee09aa3
@ludwiglierhammer
new dataset: C-RAID_1.1
e386cf6
@ludwiglierhammer
Merge branch 'release_8' of https://github.com/ludwiglierhammer/glamo…
44da4b7 
…d-marine-processing into release_8
@ludwiglierhammer
generic id check
d42ddbf
@ludwiglierhammer ludwiglierhammer mentioned this pull request Jul 9, 2025
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2 tasks
@ludwiglierhammer

ludwiglierhammer commented Sep 29, 2025 •
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Tasks to fix:

  • testing suite
  • pre-commit

ludwiglierhammer and others added 21 commits September 30, 2025 11:10
@ludwiglierhammer
docstring
6a5e8a9
@ludwiglierhammer
fixing level1b
11844ee
@ludwiglierhammer
fixing C-RAID level1b
d410d17
@ludwiglierhammer
update NOC_ANF_INFO drs
c4b0f73
@ludwiglierhammer
update additional data fodlers
4ce1f82
@ludwiglierhammer
update level1d expected header values
7faedcb
@pre-commit-ci
[pre-commit.ci] auto fixes from pre-commit.com hooks
bcbcdf1 
for more information, see https://pre-commit.ci
@ludwiglierhammer
fixing level1d
c1029c9
@ludwiglierhammer
drop_duplicates in addtional data
0c07533
@ludwiglierhammer
load metoffice external data for level1e
2d293d4
@ludwiglierhammer
fixing ICOADS_R3.0.2T level1e
dcac9ed
@ludwiglierhammer
load external files
7259b14
@ludwiglierhammer
foxing paths
2b4d443
@ludwiglierhammer
get cache directory fro external files
c13596e
@ludwiglierhammer
always compare quality flags
6b639c4
@ludwiglierhammer
drop NaN rows (latitude, longitude)
0331a40
@ludwiglierhammer
fill missing QC flags with 'unchecked'
41df198
@ludwiglierhammer
drop duplicated indexes
4541c51
@pre-commit-ci
[pre-commit.ci] auto fixes from pre-commit.com hooks
4d43956 
for more information, see https://pre-commit.ci
@ludwiglierhammer
update ICOADS_R3.0.0T level2 config file
d8a6805
@ludwiglierhammer
update valid years
e4ca9fa
@ludwiglierhammer ludwiglierhammer merged commit 4c66fe0 into glamod:main Oct 20, 2025
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