Galaxy Profiles for Planemo#445
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jmchilton merged 6 commits intogalaxyproject:masterfrom Apr 13, 2016
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Clearly that option was never tested :(.
…_option. This will be more consistent with an option that actually specifies Galaxy's database.
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- Add a ``--daemon`` flag and a ``--pid-file`` option. - Refactor API interactions to be slightly higher-level and usable outside planemo.shed. - Implement test case for this.
Namely --file_path, --database_connection, --shed_tool_conf, --shed_tool_path. Each default-able in ~/.planemo.yml. Add some initial and basic tests for ``planemo.galaxy.config`` and rework pre-seeding database ahead of implementing profiles for the above options.
Specify ``--profile <name>`` with serve, test, or their shed counterparts to maintain a Galaxy database and set of shed installs across invocations.
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