shed_upload should print better error message if repository doesn't exist #198
Description
This repository does not yet exist: https://testtoolshed.g2.bx.psu.edu/view/peterjc/fastq_pair_names
Using my fastq_pair_names tool https://github.com/peterjc/pico_galaxy/tree/master/tools/fastq_pair_names from this repository as of this commit: peterjc/pico_galaxy@eb6b8e6
According to planemo shed_lint things look OK:
$ planemo shed_lint ~/repositories/pico_galaxy/tools/fastq_pair_names/
Linting repository /mnt/galaxy/repositories/pico_galaxy/tools/fastq_pair_names
Applying linter expansion... CHECK
.. INFO: Included files all found.
Applying linter tool_dependencies_xsd... CHECK
.. INFO: No tool_dependencies.xml, skipping.
Applying linter tool_dependencies_actions... CHECK
.. INFO: No tool_dependencies.xml, skipping.
Applying linter repository_dependencies... CHECK
.. INFO: No repository_dependencies.xml, skipping.
Applying linter shed_yaml... CHECK
.. INFO: .shed.yml found and appears to be valid YAML.
Applying linter readme... CHECK
.. INFO: README found containing valid reStructuredText.
However, the planemo shed_upload does not seem to create the repository - it fails (return code 255) but does not give any error message:
$ planemo shed_upload --shed_target testtoolshed ~/repositories/pico_galaxy/tools/fastq_pair_names/ ; echo "$? returned"
cd '/mnt/galaxy/repositories/pico_galaxy/tools/fastq_pair_names' && git rev-parse HEAD
cd '/mnt/galaxy/repositories/pico_galaxy/tools/fastq_pair_names' && git diff --quiet
/mnt/galaxy/repositories/planemo/.venv/lib/python2.6/site-packages/requests-2.7.0-py2.6.egg/requests/packages/urllib3/util/ssl_.py:90: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. For more information, see https://urllib3.readthedocs.org/en/latest/security.html#insecureplatformwarning.
InsecurePlatformWarning
/mnt/galaxy/repositories/planemo/.venv/lib/python2.6/site-packages/requests-2.7.0-py2.6.egg/requests/packages/urllib3/connectionpool.py:768: InsecureRequestWarning: Unverified HTTPS request is being made. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.org/en/latest/security.html
InsecureRequestWarning)
255 returned
(The insecure warnings occur on other operations and seem to be harmless)
Using planemo as of 52b0725 (start of work on v0.12.0)