Merged
Conversation
bgruening
approved these changes
Apr 19, 2025
Member
bgruening
left a comment
There was a problem hiding this comment.
Works great!
I can not open Visualizations as Anonymous user, but that might be a different issue.
| <?xml version="1.0" encoding="UTF-8"?> | ||
| <!DOCTYPE visualization SYSTEM "../../visualization.dtd"> | ||
| <visualization name="Niivue" embeddable="true"> | ||
| <description>WebGL2 based medical image viewer</description> |
Member
There was a problem hiding this comment.
Not sure if WebGL2 should be in the main description, isn't it too technical? It could later go into the help.
Contributor
Author
There was a problem hiding this comment.
Changed this to: Interactive viewer for medical and neuroimaging data
| <data><label>Winter</label><value>winter</value></data> | ||
| </data> | ||
| </input> | ||
| <input> |
Member
There was a problem hiding this comment.
the indentation is wrong here
| </requirements> | ||
| <entry_point entry_point_type="script" src="dist/index.js" css="dist/index.css" /> | ||
| <settings> | ||
| <input> |
Member
There was a problem hiding this comment.
The indentation is wrong here, and becomes later a bit confusing.
|
This PR was merged without a "kind/" label, please correct. |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
This PR integrates Niivue, a WebGL-based library for interactive visualization of NIfTI images directly in the browser. Niivue supports 2D slice views, 3D rendering, overlays, and user interaction.
Test dataset available at http://cdn.jsdelivr.net/gh/galaxyproject/galaxy-test-data/nifti.nii1.gz
How to test the changes?
(Select all options that apply)
License