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Binary closing in threshold_components operates on spatially downsampled movie without downsampling se only for corr_pnr

Status: Open.

#1575 In flatironinstitute/Caiman;

· ethanbb opened on Mar 4, 2026

estimates.save_NWB() fails

Status: Open.

#1574 In flatironinstitute/Caiman;

· katonage opened on Feb 26, 2026

nrg contour pixel sort order - dealing with ties

Status: Open.

#1570 In flatironinstitute/Caiman;

· ethanbb opened on Feb 17, 2026

[Legacy v1.9.16] evaluate_components crashes with TypeError when using seeded initialization (Ain) and only_init=True

Status: Open.

#1569 In flatironinstitute/Caiman;

· LinxiuZeng opened on Feb 11, 2026

VolPy Mask_RCNN doesn't work

Status: Open.

#1567 In flatironinstitute/Caiman;

· bobqianic opened on Feb 5, 2026

Hardware recommendations for running CaImAn on 2P datasets

Status: Open.

#1561 In flatironinstitute/Caiman;

· annegeorge12 opened on Jan 27, 2026

Feature Suggestion: Interactive CNMF Debug Stage Viewer with Napari

Status: Open.

#1556 In flatironinstitute/Caiman;

· sheergalor opened on Jan 14, 2026

Saved movie looks completely black

Status: Open.

#1553 In flatironinstitute/Caiman;

· vambrosi opened on Dec 25, 2025

demo_pipeline cannot detect my neurons

Status: Open.

#1552 In flatironinstitute/Caiman;

· harshidapancholi opened on Dec 22, 2025

ImportError: numpy.core.multiarray failed to import (auto-generated because you didn't call 'numpy.import_array()' after cimporting numpy; use '<void>numpy._import_array' to disable if you are certain you don't need it)

Status: Open.

#1550 In flatironinstitute/Caiman;

· bpavie opened on Dec 17, 2025

Kernel keeps dying when I run cnmf_refit.estimates.evaluate_components()

Status: Open.

#1544 In flatironinstitute/Caiman;

· nikolaswalteros opened on Nov 19, 2025

The error of running cnm_online.fit_online();

Status: Open.

#1541 In flatironinstitute/Caiman;

· he599933-ui opened on Nov 10, 2025