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farchaab/README.md

Hi there, I'm Farid 👋

Passionate Bioinformatician !

  • 🧑‍🎓 Currently doing a PhD in bioinformatics @metagenlab
  • 🧬 Genomics and metagenomics enthusiast !
  • 🏗️: Nextflow and Snakemake pipeline builder !
  • 🥅 2026 Goals: Learn rust fundamentals
  • Avid 🏊 and 🚴

🧰 Languages and Tools:

Linux

Bash

Python

Docker

Visual Studio Code

Nextflow

Snakemake


⚡ Recent Activity

  1. 🗣 Commented on #66 in metagenlab/MeSS
  2. Labeled issue #44 in metagenlab/MeSS
  3. Labeled issue #66 in metagenlab/MeSS
  4. Labeled issue #66 in metagenlab/MeSS
  5. Assigned issue #66 in metagenlab/MeSS

📊 Stats

farchaab's Stats

farchaab's Top Languages

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  1. metagenlab/MeSS metagenlab/MeSS Public

    Snakemake pipeline for simulating shotgun metagenomic samples

    Python 29 3

  2. metagenlab/assembly_finder metagenlab/assembly_finder Public

    snakemake-powered cli to download genomes using NCBI datasets

    Python 14

  3. metagenlab/zAMP metagenlab/zAMP Public

    zAMP is a bioinformatic pipeline designed for convenient, reproducible and scalable amplicon-based metagenomics

    R 9 5

  4. metagenlab/zshoman metagenlab/zshoman Public

    The Shotgun metagenomics analysis pipeline

    Nextflow 2