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@eco-evo-genomics

Eco-Evolutionary Genomics Lab

Research group Steven Van Belleghem @ KU Leuven

Welcome to our GitHub repository! 🧬🪲🔬🦋

Environmental change is exerting strong selection pressures on natural populations now more than ever. Fortunately, there is hope, given that examples exist of species adapting remarkably quickly with complex genetic and phenotypic changes within only a few generations. Understanding the molecular and genetic mechanisms behind these examples of ‘high evolvability’ and to what extent they are present in other species will help us better forecast the effects of environmental change.

Topics that we intensively work on are:

  • Generating new genomic and computational resources to study adaptation and signals of selection from genomes.
  • Understanding the genetic architecture and evolutionary history of cases of rapid adaptation.
  • Studying the importance of reusing pre-existing genetic variation for wild populations to adapt.
  • Unraveling the fast evolution of genome structure and gene regulation.
  • Understanding the interplay of developmental plasticity and genetic adaptation.

We work intensively with beetles (Pogonus chalceus) and ​​​​​​water fleas (Daphnia magna) but honestly, we're game for studying any critter that crosses our path. Join us on this genomic adventure as we explore how life adapts and evolves!

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  1. annotation annotation Public

    Scripts and pipelines for gene and functional annotations

    Shell

  2. bioinformatics-basics bioinformatics-basics Public

    Forked from mariamadrid19/Bioinformatics-basics

    Commands for basic bioinformatics tools

    Shell

  3. Tutorial_pan_genomics Tutorial_pan_genomics Public

    Forked from StevenVB12/Tutorial_pan_genomics

    Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial presents an example using two haplotypes of the optix locus in Heli…

    R

  4. genome-assembly genome-assembly Public

    Scripts and pipelines for genome assemblies

    Shell

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