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@njzjz njzjz commented Jan 27, 2024

  • Set deepmd.pt.utils.ase_calc.DPCalculator as an alias of deepmd.calculator.DP;
  • Replace deepmd_pt with deepmd.pt in deep_pot.py; fix (atomic) virial output shape of DeepPot; add tests for them;
  • Set pbc in pt/test_calculator.py as it requests stress.

- Set `deepmd.pt.utils.ase_calc.DPCalculator` as an alias of `deepmd.calculator.DP`
- Replace `deepmd_pt` with  `deepmd.pt` in `deep_pot.py`
- Set pbc in `pt/test_calculator.py` as it requests stress

Signed-off-by: Jinzhe Zeng <jinzhe.zeng@rutgers.edu>
return super().__new__(DeepPotTF)
elif backend == DPBackend.PyTorch:
from deepmd_pt.infer.deep_eval import DeepPot as DeepPotPT
from deepmd.pt.infer.deep_eval import DeepPot as DeepPotPT

Check notice

Code scanning / CodeQL

Cyclic import

Import of module [deepmd.pt.infer.deep_eval](1) begins an import cycle.
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njzjz commented Jan 27, 2024

Set pbc in pt/test_calculator.py as it requests stress

I think it's meaningless to calculate stress for a non-periodic system, right?

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codecov bot commented Jan 27, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (f4d7c7e) 74.29% compared to head (e0cc0bb) 74.32%.
Report is 3 commits behind head on devel.

Additional details and impacted files
@@            Coverage Diff             @@
##            devel    #3186      +/-   ##
==========================================
+ Coverage   74.29%   74.32%   +0.02%     
==========================================
  Files         343      343              
  Lines       31638    31608      -30     
  Branches     1592     1592              
==========================================
- Hits        23506    23492      -14     
+ Misses       7207     7191      -16     
  Partials      925      925              

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Set pbc in pt/test_calculator.py as it requests stress

I think it's meaningless to calculate stress for a non-periodic system, right?

no it does not make sense

return super().__new__(DeepPotTF)
elif backend == DPBackend.PyTorch:
from deepmd_pt.infer.deep_eval import DeepPot as DeepPotPT
from deepmd.pt.infer.deep_eval import DeepPot as DeepPotPT
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We may want to check with the pt backend in the UTs of python inference

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please add the UT as commented.

@njzjz njzjz changed the title Replace deepmd.pt.utils.ase_calc with deepmd.calculator Fix PT DeepPot and replace ASE calculator Jan 27, 2024
njzjz added 2 commits January 27, 2024 05:50
Signed-off-by: Jinzhe Zeng <jinzhe.zeng@rutgers.edu>
Signed-off-by: Jinzhe Zeng <jinzhe.zeng@rutgers.edu>
@njzjz njzjz requested a review from wanghan-iapcm January 27, 2024 11:17
@wanghan-iapcm wanghan-iapcm merged commit 3e4715f into deepmodeling:devel Jan 27, 2024
@njzjz njzjz mentioned this pull request Apr 2, 2024
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